Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070085.5 | 
| Conread position: | 1-151 | 
| Cow position: | chr6:34911237-34911401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 1-157 | 
| Cow position: | chr6:3952759-3952610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 1-157 | 
| Cow position: | chr6:15243077-15242928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-158 | 
| Cow position: | chr6:47989664-47989516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 1-159 | 
| Cow position: | chr6:28148502-28148346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 1-160 | 
| Cow position: | chr6:12669336-12669184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 86, 48 | 
| Conread position: | 1-160 | 
| Cow position: | chr6:42483653-42483503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 1-161 | 
| Cow position: | chr6:14913996-14914148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 1-161 | 
| Cow position: | chr6:21535278-21535127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 1-161 | 
| Cow position: | chr6:28561930-28562081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-161 | 
| Cow position: | chr6:35984896-35985049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-161 | 
| Cow position: | chr6:45159817-45159970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-161 | 
| Cow position: | chr6:58725605-58725457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 1-165 | 
| Cow position: | chr6:18608572-18608728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-165 | 
| Cow position: | chr6:46558292-46558141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 1-166 | 
| Cow position: | chr6:24468161-24468313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 1-167 | 
| Cow position: | chr6:3937025-3936864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 92, 41 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:16137529-16137690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 113, 48 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:22850014-22850174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:29852817-29852985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 50, 71 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:50771123-50771282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:53732223-53732062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 86, 33 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:59687572-59687732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-168 | 
| Cow position: | chr6:62670109-62669946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 72, 48 | 
| Conread position: | 1-169 | 
| Cow position: | chr6:8369662-8369502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 1-171 | 
| Cow position: | chr6:28559779-28559616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 11, 49 | 
| Conread position: | 1-172 | 
| Cow position: | chr6:36225348-36225186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-172 | 
| Cow position: | chr6:57079664-57079501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:8186949-8187113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:19936330-19936493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:21052208-21052373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 98, 33 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:26054662-26054828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 102, 48 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:26408264-26408428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:35171852-35171682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 116, 90 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:49686058-49685894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:54821072-54820908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:57467837-57467673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 1-176 | 
| Cow position: | chr6:67574628-67574462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-178 | 
| Cow position: | chr6:19563241-19563412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 96, 34 | 
| Conread position: | 1-180 | 
| Cow position: | chr6:21004918-21004746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 97, 34 | 
| Conread position: | 1-180 | 
| Cow position: | chr6:55296854-55297025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 2-176 | 
| Cow position: | chr6:5330651-5330486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 3-151 | 
| Cow position: | chr6:60088239-60088378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 3-154 | 
| Cow position: | chr6:23381430-23381574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 3-156 | 
| Cow position: | chr6:22876692-22876838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 3-157 | 
| Cow position: | chr6:53932609-53932755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 3-161 | 
| Cow position: | chr6:14063052-14063214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 3-161 | 
| Cow position: | chr6:18447279-18447430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 3-161 | 
| Cow position: | chr6:26764586-26764740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 83, 31 | 
| Conread position: | 3-161 | 
| Cow position: | chr6:54840264-54840420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 3-165 | 
| Cow position: | chr6:35181018-35181173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 3-165 | 
| Cow position: | chr6:44543911-44544065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 3-166 | 
| Cow position: | chr6:49824856-49825013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 148, 46 | 
| Conread position: | 3-168 | 
| Cow position: | chr6:15587356-15587514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 3-168 | 
| Cow position: | chr6:31928875-31928717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 3-168 | 
| Cow position: | chr6:54828084-54828243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 159, 44 | 
| Conread position: | 3-168 | 
| Cow position: | chr6:57089440-57089284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 3-171 | 
| Cow position: | chr6:59101083-59101243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 3-172 | 
| Cow position: | chr6:24110520-24110359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 3-173 | 
| Cow position: | chr6:5445904-5445744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 3-176 | 
| Cow position: | chr6:21475961-21475801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 3-181 | 
| Cow position: | chr6:16411849-16411679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 4-163 | 
| Cow position: | chr6:48436065-48435916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 4-166 | 
| Cow position: | chr6:12761515-12761362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 4-166 | 
| Cow position: | chr6:38853421-38853576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 103, 38 | 
| Conread position: | 4-176 | 
| Cow position: | chr6:15937617-15937781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 5-160 | 
| Cow position: | chr6:32006222-32006366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 5-161 | 
| Cow position: | chr6:10039960-10039811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 5-192 | 
| Cow position: | chr6:40833787-40833958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 8-140 | 
| Cow position: | chr6:31778950-31778819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 8-165 | 
| Cow position: | chr6:51835629-51835483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 9-158 | 
| Cow position: | chr6:41733865-41733723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-150 | 
| Cow position: | chr6:30688280-30688413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-176 | 
| Cow position: | chr6:15058604-15058450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 11-158 | 
| Cow position: | chr6:43906453-43906593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 11-159 | 
| Cow position: | chr6:16016263-16016123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 11-160 | 
| Cow position: | chr6:15974295-15974435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 11-160 | 
| Cow position: | chr6:19045856-19045711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 71, 33 | 
| Conread position: | 11-161 | 
| Cow position: | chr6:5095314-5095454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 11-174 | 
| Cow position: | chr6:27219394-27219244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 11-178 | 
| Cow position: | chr6:51529952-51530116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 12-176 | 
| Cow position: | chr6:48379384-48379540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 45-163 | 
| Cow position: | chr6:40032388-40032276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 55-159 | 
| Cow position: | chr6:69153603-69153499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 55-165 | 
| Cow position: | chr6:58076587-58076477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 55-168 | 
| Cow position: | chr6:18440284-18440397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 55-169 | 
| Cow position: | chr6:30895799-30895911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 55-176 | 
| Cow position: | chr6:21467074-21467194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 55-181 | 
| Cow position: | chr6:31865286-31865161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 57-161 | 
| Cow position: | chr6:7801206-7801309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 58-163 | 
| Cow position: | chr6:8125517-8125412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
