Cow genome map
Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
Conread position: | 1-136 |
Cow position: | chr9:48017936-48017808 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-148 |
Cow position: | chr9:12495045-12495185 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-150 |
Cow position: | chr9:29091601-29091743 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-158 |
Cow position: | chr9:16826371-16826217 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 101, 34 |
Conread position: | 1-158 |
Cow position: | chr9:20355700-20355845 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 1-159 |
Cow position: | chr9:36457827-36457978 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-160 |
Cow position: | chr9:13744103-13743950 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 99, 48 |
Conread position: | 1-160 |
Cow position: | chr9:34196025-34196174 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 147, 26 |
Conread position: | 1-160 |
Cow position: | chr9:34276382-34276230 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-160 |
Cow position: | chr9:34279228-34279073 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 116, 44 |
Conread position: | 1-161 |
Cow position: | chr9:1729856-1729693 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-161 |
Cow position: | chr9:5068668-5068822 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 102, 48 |
Conread position: | 1-161 |
Cow position: | chr9:8645095-8645247 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-161 |
Cow position: | chr9:11447976-11447827 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr9:12786645-12786492 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-161 |
Cow position: | chr9:17785739-17785585 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 7, 49 |
Conread position: | 1-161 |
Cow position: | chr9:19657143-19656995 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-161 |
Cow position: | chr9:27279137-27279290 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-161 |
Cow position: | chr9:27495062-27495218 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 113, 50 |
Conread position: | 1-161 |
Cow position: | chr9:30194842-30194992 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 116, 48 |
Conread position: | 1-161 |
Cow position: | chr9:34760535-34760383 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-161 |
Cow position: | chr9:45711172-45711019 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr9:47214720-47214564 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 12, 49 |
Conread position: | 1-161 |
Cow position: | chr9:51566667-51566514 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-161 |
Cow position: | chr9:52755021-52754869 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr9:53323957-53323803 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 11, 42 |
Conread position: | 1-161 |
Cow position: | chr9:61019534-61019381 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-163 |
Cow position: | chr9:33114170-33114329 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 80, 41 |
Conread position: | 1-165 |
Cow position: | chr9:54677088-54677249 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 90, 44 |
Conread position: | 1-166 |
Cow position: | chr9:13169834-13169677 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 117, 41 |
Conread position: | 1-166 |
Cow position: | chr9:13670467-13670619 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr9:24887036-24887192 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr9:32052107-32052262 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-166 |
Cow position: | chr9:36627953-36628104 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-166 |
Cow position: | chr9:51620275-51620431 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr9:61022450-61022609 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 12, 43 |
Conread position: | 1-168 |
Cow position: | chr9:25583662-25583818 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-168 |
Cow position: | chr9:32670115-32669959 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-168 |
Cow position: | chr9:35028336-35028177 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-169 |
Cow position: | chr9:9459820-9459973 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-172 |
Cow position: | chr9:36410519-36410356 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr9:14738083-14738241 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr9:28315255-28315421 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 96, 48 |
Conread position: | 1-173 |
Cow position: | chr9:31344779-31344615 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-173 |
Cow position: | chr9:34286629-34286791 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-173 |
Cow position: | chr9:35403410-35403575 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 53, 29 |
Conread position: | 1-173 |
Cow position: | chr9:40603498-40603660 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-173 |
Cow position: | chr9:44396490-44396654 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 2-160 |
Cow position: | chr9:8537138-8537288 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 2-160 |
Cow position: | chr9:54598505-54598653 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 2-161 |
Cow position: | chr9:17769153-17769299 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 2-173 |
Cow position: | chr9:34423450-34423613 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 138 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 2-174 |
Cow position: | chr9:9091275-9091112 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 3-154 |
Cow position: | chr9:26057596-26057456 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 3-161 |
Cow position: | chr9:13993596-13993746 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 86, 44 |
Conread position: | 3-161 |
Cow position: | chr9:26394515-26394368 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-161 |
Cow position: | chr9:41644920-41644769 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-174 |
Cow position: | chr9:15215857-15215694 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-176 |
Cow position: | chr9:55013508-55013337 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 81, 42 |
Conread position: | 3-187 |
Cow position: | chr9:42061926-42062105 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 46 |
Conread position: | 3-188 |
Cow position: | chr9:20828737-20828912 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 142 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 4-151 |
Cow position: | chr9:3946312-3946177 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 4-161 |
Cow position: | chr9:41282846-41282996 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 6-161 |
Cow position: | chr9:5110692-5110839 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 9-173 |
Cow position: | chr9:28342816-28342659 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 55, 40 |
Conread position: | 11-161 |
Cow position: | chr9:9724038-9723895 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-161 |
Cow position: | chr9:26102573-26102709 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-163 |
Cow position: | chr9:26477053-26477199 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 126 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 98, 31 |
Conread position: | 11-170 |
Cow position: | chr9:14357253-14357404 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 12-158 |
Cow position: | chr9:50977414-50977275 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 117 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 13-172 |
Cow position: | chr9:11200097-11199946 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 13-176 |
Cow position: | chr9:30402586-30402430 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 108, 21 |
Conread position: | 14-160 |
Cow position: | chr9:31514091-31513952 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 15-168 |
Cow position: | chr9:37951055-37950909 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 34-176 |
Cow position: | chr9:25375880-25375741 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 46-159 |
Cow position: | chr9:41964865-41964756 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 10, 48 |
Conread position: | 55-176 |
Cow position: | chr9:9815288-9815408 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-181 |
Cow position: | chr9:8467934-8468057 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.