Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01H080027.5
        

               Conread position:
               1-149
               

               Cow position:
               chr13:29134064-29133915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               6-134
               

               Cow position:
               chr13:30957871-30957745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 98
               

               Conread position:
               1047-1149
               

               Cow position:
               chr13:41861311-41861209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1146-1298
               

               Cow position:
               chr13:41860475-41860323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1291-1386
               

               Cow position:
               chr13:41859137-41859040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1382-1668
               

               Cow position:
               chr13:41857030-41856744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 150
               
Show alignments to all cow chromosomes.