Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H110101.5 |
| Conread position: | 1-137 |
| Cow position: | chr9:41017660-41017527 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 89-362 |
| Cow position: | chr9:40981299-40981025 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 137-370 |
| Cow position: | chr9:41017047-41016813 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 363-495 |
| Cow position: | chr9:40980925-40980793 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-500 |
| Cow position: | chr9:41016700-41016563 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 127 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-500 |
| Cow position: | chr9:40955022-40954889 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 497-693 |
| Cow position: | chr9:40948444-40948248 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 499-693 |
| Cow position: | chr9:41002351-41002157 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 511-693 |
| Cow position: | chr9:40975740-40975558 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 692-983 |
| Cow position: | chr9:40999043-40998752 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-988 |
| Cow position: | chr9:40947258-40946977 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 979-1366 |
| Cow position: | chr9:40997054-40996667 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1354-1530 |
| Cow position: | chr9:40995166-40994990 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1355-1531 |
| Cow position: | chr9:40941314-40941138 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 1523-1944 |
| Cow position: | chr9:40989096-40988686 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 97 |
Show alignments to all cow chromosomes.