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Cow genome map

           
Conread name:
           
Ss1.1-Utr1-UTR010020F01.5.5
        

               
Conread position:
               
118-393
               

               
Cow position:
               
chr10:68992785-68992510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-824
               

               
Cow position:
               
chr10:69015779-69015400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
426-1166
               

               
Cow position:
               
chr10:68990948-68990216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
985-1500
               

               
Cow position:
               
chr10:10964341-10963824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
370, 10
               

               
Conread position:
               
1142-1500
               

               
Cow position:
               
chr10:35792138-35791766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 268
               

               
Conread position:
               
1151-1354
               

               
Cow position:
               
chr10:14188414-14188624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
1151-1397
               

               
Cow position:
               
chr10:41676214-41676473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
1151-1500
               

               
Cow position:
               
chr10:30353048-30352681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
1155-1500
               

               
Cow position:
               
chr10:45371255-45370888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 189
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr10:50182861-50183215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
1157-1496
               

               
Cow position:
               
chr10:49146700-49146358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
1159-1500
               

               
Cow position:
               
chr10:1996482-1996828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 171
               

               
Conread position:
               
1160-1355
               

               
Cow position:
               
chr10:46799330-46799127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
1161-1353
               

               
Cow position:
               
chr10:26102960-26103150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
1161-1465
               

               
Cow position:
               
chr10:60446922-60446601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 280
               

               
Conread position:
               
1161-1476
               

               
Cow position:
               
chr10:763096-762777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr10:15817607-15817959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr10:24871359-24870998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
1162-1467
               

               
Cow position:
               
chr10:37068228-37068546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
1162-1500
               

               
Cow position:
               
chr10:17844953-17844597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
1163-1324
               

               
Cow position:
               
chr10:6066989-6067147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
1163-1360
               

               
Cow position:
               
chr10:58573544-58573734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1163-1383
               

               
Cow position:
               
chr10:5784065-5784292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
1163-1386
               

               
Cow position:
               
chr10:6242335-6242557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
1163-1392
               

               
Cow position:
               
chr10:43586096-43586339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
1163-1444
               

               
Cow position:
               
chr10:22888626-22888926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
1163-1457
               

               
Cow position:
               
chr10:48407321-48407020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
1163-1490
               

               
Cow position:
               
chr10:59009951-59010297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr10:7366599-7366952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr10:37667991-37668324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 77
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr10:59572080-59571735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr10:62353645-62353297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
91, 131
               

               
Conread position:
               
1164-1500
               

               
Cow position:
               
chr10:6852449-6852105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
1165-1389
               

               
Cow position:
               
chr10:37425952-37426183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
1165-1500
               

               
Cow position:
               
chr10:721476-721135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
183, 161
               

               
Conread position:
               
1166-1380
               

               
Cow position:
               
chr10:27544637-27544412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 204
               

               
Conread position:
               
1166-1493
               

               
Cow position:
               
chr10:17022384-17022723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
1166-1496
               

               
Cow position:
               
chr10:10148835-10148492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 270
               

               
Conread position:
               
1166-1500
               

               
Cow position:
               
chr10:17073180-17073525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 270
               

               
Conread position:
               
1167-1500
               

               
Cow position:
               
chr10:54848962-54848610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
1171-1386
               

               
Cow position:
               
chr10:2857227-2857002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
1171-1498
               

               
Cow position:
               
chr10:55849505-55849192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
213, 74
               

               
Conread position:
               
1172-1389
               

               
Cow position:
               
chr10:29379792-29380007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
185, 91
               

               
Conread position:
               
1172-1397
               

               
Cow position:
               
chr10:59462308-59462074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
1172-1467
               

               
Cow position:
               
chr10:3364006-3364310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 214
               

               
Conread position:
               
1172-1497
               

               
Cow position:
               
chr10:52695549-52695892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
1172-1500
               

               
Cow position:
               
chr10:2613545-2613200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 142
               

               
Conread position:
               
1173-1391
               

               
Cow position:
               
chr10:10634390-10634167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
1173-1423
               

               
Cow position:
               
chr10:25822076-25822329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 131
               

               
Conread position:
               
1173-1473
               

               
Cow position:
               
chr10:7383439-7383750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 257
               

               
Conread position:
               
1174-1382
               

               
Cow position:
               
chr10:49634242-49634024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1174-1499
               

               
Cow position:
               
chr10:28152219-28152545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
1174-1500
               

               
Cow position:
               
chr10:8093146-8093480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
1174-1500
               

               
Cow position:
               
chr10:50533701-50534040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 163
               

               
Conread position:
               
1175-1358
               

               
Cow position:
               
chr10:60345746-60345926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1175-1430
               

               
Cow position:
               
chr10:58043951-58044229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1175-1500
               

               
Cow position:
               
chr10:31362043-31362374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 233
               

               
Conread position:
               
1177-1500
               

               
Cow position:
               
chr10:51942950-51942624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
1178-1335
               

               
Cow position:
               
chr10:46718531-46718692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1178-1347
               

               
Cow position:
               
chr10:47429996-47429822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
1178-1347
               

               
Cow position:
               
chr10:57095032-57095207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr10:14542045-14541856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr10:34903646-34903464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 155
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr10:49029821-49029640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr10:59417065-59417250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1178-1360
               

               
Cow position:
               
chr10:69840521-69840332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1178-1361
               

               
Cow position:
               
chr10:10829214-10829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 106
               

               
Conread position:
               
1178-1363
               

               
Cow position:
               
chr10:43459881-43460076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 126
               

               
Conread position:
               
1178-1366
               

               
Cow position:
               
chr10:34646283-34646473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
1178-1374
               

               
Cow position:
               
chr10:11112795-11112589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
1178-1378
               

               
Cow position:
               
chr10:38205544-38205749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1178-1381
               

               
Cow position:
               
chr10:38995408-38995187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1178-1397
               

               
Cow position:
               
chr10:17150045-17149822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
1178-1446
               

               
Cow position:
               
chr10:60697456-60697732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
1178-1446
               

               
Cow position:
               
chr10:61509774-61510053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
1178-1466
               

               
Cow position:
               
chr10:46327863-46327556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 260
               

               
Conread position:
               
1178-1467
               

               
Cow position:
               
chr10:45624003-45624283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
1178-1475
               

               
Cow position:
               
chr10:58451208-58451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
1178-1484
               

               
Cow position:
               
chr10:61921970-61922289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
74, 158
               

               
Conread position:
               
1178-1490
               

               
Cow position:
               
chr10:6384698-6384379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 254
               

               
Conread position:
               
1178-1490
               

               
Cow position:
               
chr10:30369654-30369967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1178-1493
               

               
Cow position:
               
chr10:37884640-37884953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
191, 79
               

               
Conread position:
               
1178-1496
               

               
Cow position:
               
chr10:14947426-14947100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr10:13764991-13765329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr10:30224844-30224522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr10:37818383-37818722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 171
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr10:55733437-55733765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 154
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:2704357-2704043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 59
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:6490051-6489703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:6531993-6532318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 177
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:8404379-8404048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:10120360-10120032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:11966671-11967008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:20095940-20095591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 267
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:20553352-20553016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:22527747-22528070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
179, 68
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:33215965-33215634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:34661159-34661480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:35731355-35731689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:37529101-37529432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:47773893-47773563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:50558757-50559094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 255
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:54504776-54504439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 207
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:57786509-57786173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr10:67442948-67443272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
1179-1389
               

               
Cow position:
               
chr10:2535734-2535522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
1179-1466
               

               
Cow position:
               
chr10:3276140-3275861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
67, 167
               

               
Conread position:
               
1179-1497
               

               
Cow position:
               
chr10:37415954-37415625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 252
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr10:3999062-3998737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr10:50134647-50134973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr10:60236928-60237260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
1180-1348
               

               
Cow position:
               
chr10:59455532-59455366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1180-1354
               

               
Cow position:
               
chr10:37708855-37709030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1180-1355
               

               
Cow position:
               
chr10:24971160-24971341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1180-1364
               

               
Cow position:
               
chr10:7089511-7089322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
1180-1368
               

               
Cow position:
               
chr10:49862634-49862441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
1180-1376
               

               
Cow position:
               
chr10:32080438-32080238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 149
               

               
Conread position:
               
1180-1381
               

               
Cow position:
               
chr10:23390148-23390356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
1180-1382
               

               
Cow position:
               
chr10:24448030-24447821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
1180-1387
               

               
Cow position:
               
chr10:11047034-11047251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
1180-1389
               

               
Cow position:
               
chr10:31803307-31803531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
1180-1441
               

               
Cow position:
               
chr10:55395808-55396085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 259
               

               
Conread position:
               
1180-1471
               

               
Cow position:
               
chr10:39124306-39123992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
66, 264
               

               
Conread position:
               
1180-1494
               

               
Cow position:
               
chr10:40163763-40164094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
1180-1496
               

               
Cow position:
               
chr10:51944529-51944196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr10:48741011-48741323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr10:57461524-57461191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 262
               

               
Conread position:
               
1180-1498
               

               
Cow position:
               
chr10:16683658-16683978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
1180-1498
               

               
Cow position:
               
chr10:54947973-54948301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 251
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr10:48573527-48573857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:1978501-1978826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 253
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:5599828-5600161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 213
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:9575878-9576204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 222
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:17863734-17863421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
177, 10
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:23055922-23056245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 21
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:28841123-28840790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:31027470-31027812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
70, 251
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:31400728-31401061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:34654940-34655279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 258
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:35862061-35862393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:37235378-37235716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 266
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:38376504-38376818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:39387619-39387293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 182
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr10:46195951-46195616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
1181-1355
               

               
Cow position:
               
chr10:37507982-37508162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
1181-1453
               

               
Cow position:
               
chr10:45728791-45729057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 177
               

               
Conread position:
               
1181-1500
               

               
Cow position:
               
chr10:24756578-24756250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
1181-1500
               

               
Cow position:
               
chr10:64285630-64285959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
69, 280
               

               
Conread position:
               
1182-1379
               

               
Cow position:
               
chr10:35108735-35108544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1182-1380
               

               
Cow position:
               
chr10:23346138-23346343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
1182-1499
               

               
Cow position:
               
chr10:35245784-35246105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr10:23576709-23576376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr10:52296665-52296334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr10:56828150-56828484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 254
               

               
Conread position:
               
1184-1389
               

               
Cow position:
               
chr10:39622197-39622403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
1184-1500
               

               
Cow position:
               
chr10:42746077-42745749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
1187-1499
               

               
Cow position:
               
chr10:10135132-10134819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
1187-1500
               

               
Cow position:
               
chr10:22390760-22390422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 255
               

               
Conread position:
               
1188-1500
               

               
Cow position:
               
chr10:13390903-13391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 50
               

               
Conread position:
               
1189-1498
               

               
Cow position:
               
chr10:47690536-47690229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
1189-1500
               

               
Cow position:
               
chr10:28395146-28395466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
1191-1497
               

               
Cow position:
               
chr10:33666002-33665675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1191-1500
               

               
Cow position:
               
chr10:21082532-21082218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 242
               

               
Conread position:
               
1191-1500
               

               
Cow position:
               
chr10:24276570-24276899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
1191-1500
               

               
Cow position:
               
chr10:67626841-67627159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
1192-1499
               

               
Cow position:
               
chr10:6505511-6505198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 210
               

               
Conread position:
               
1197-1389
               

               
Cow position:
               
chr10:17293287-17293481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
1197-1477
               

               
Cow position:
               
chr10:30360665-30360376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
1197-1499
               

               
Cow position:
               
chr10:30613973-30613673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 192
               

               
Conread position:
               
1199-1500
               

               
Cow position:
               
chr10:21422010-21422315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
1202-1500
               

               
Cow position:
               
chr10:12486396-12486097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
156, 31
               

               
Conread position:
               
1202-1500
               

               
Cow position:
               
chr10:35802212-35802535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 251
               

               
Conread position:
               
1202-1500
               

               
Cow position:
               
chr10:52278873-52278564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 228
               

               
Conread position:
               
1205-1497
               

               
Cow position:
               
chr10:53674962-53674661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
1210-1421
               

               
Cow position:
               
chr10:46886291-46886079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
1210-1488
               

               
Cow position:
               
chr10:9675327-9675612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
1210-1499
               

               
Cow position:
               
chr10:6665425-6665707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
1214-1500
               

               
Cow position:
               
chr10:15871744-15872038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 219
               

               
Conread position:
               
1219-1398
               

               
Cow position:
               
chr10:40744240-40744057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
1224-1497
               

               
Cow position:
               
chr10:1488947-1488675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
1229-1500
               

               
Cow position:
               
chr10:4164381-4164101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1235-1449
               

               
Cow position:
               
chr10:49947776-49947993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
1235-1500
               

               
Cow position:
               
chr10:10720567-10720839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
1236-1487
               

               
Cow position:
               
chr10:31116780-31116532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
1240-1500
               

               
Cow position:
               
chr10:12315248-12314990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
1241-1500
               

               
Cow position:
               
chr10:22433811-22434086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
1242-1375
               

               
Cow position:
               
chr10:24902886-24903020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1242-1420
               

               
Cow position:
               
chr10:60491168-60491347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
1242-1421
               

               
Cow position:
               
chr10:52827499-52827679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
1242-1422
               

               
Cow position:
               
chr10:41760223-41760413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 89
               

               
Conread position:
               
1242-1440
               

               
Cow position:
               
chr10:55600059-55600250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
1242-1484
               

               
Cow position:
               
chr10:37913087-37913337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
1242-1488
               

               
Cow position:
               
chr10:24022185-24022432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
1242-1496
               

               
Cow position:
               
chr10:6530287-6530034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
1242-1497
               

               
Cow position:
               
chr10:15115713-15115452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 195
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:77470-77223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:4184294-4184025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 193
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:19372238-19372504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 189
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:19895491-19895232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
140, 19
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:24132725-24132984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 81
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:24375642-24375386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:28178726-28178975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:30522965-30523233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:32503526-32503281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:35778803-35779068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:48462245-48462505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr10:67288389-67288129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
1243-1381
               

               
Cow position:
               
chr10:54819363-54819227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 82
               

               
Conread position:
               
1243-1500
               

               
Cow position:
               
chr10:50609651-50609375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1246-1488
               

               
Cow position:
               
chr10:42451162-42451392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
1246-1493
               

               
Cow position:
               
chr10:28776445-28776191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
102, 179
               

               
Conread position:
               
1246-1498
               

               
Cow position:
               
chr10:39228242-39227981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 191
               

               
Conread position:
               
1246-1499
               

               
Cow position:
               
chr10:60961029-60960774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 150
               

               
Conread position:
               
1246-1500
               

               
Cow position:
               
chr10:7817202-7816941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
1247-1470
               

               
Cow position:
               
chr10:4151632-4151410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
110, 171
               

               
Conread position:
               
1247-1496
               

               
Cow position:
               
chr10:51861985-51862236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 182
               

               
Conread position:
               
1247-1500
               

               
Cow position:
               
chr10:49923280-49923518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 137
               

               
Conread position:
               
1249-1360
               

               
Cow position:
               
chr10:19679189-19679077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1249-1389
               

               
Cow position:
               
chr10:37768394-37768255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
1249-1475
               

               
Cow position:
               
chr10:44421814-44422042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
1249-1475
               

               
Cow position:
               
chr10:65133035-65132818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
1249-1478
               

               
Cow position:
               
chr10:22633534-22633769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
1249-1495
               

               
Cow position:
               
chr10:33116860-33117111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
1249-1496
               

               
Cow position:
               
chr10:23506400-23506649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
1249-1497
               

               
Cow position:
               
chr10:24732395-24732150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 87
               

               
Conread position:
               
1249-1499
               

               
Cow position:
               
chr10:30787537-30787779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
220, 30
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr10:15462594-15462323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
51, 190
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr10:20132437-20132695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 184
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr10:29252255-29251999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr10:52113582-52113836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr10:55621763-55622012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
1250-1475
               

               
Cow position:
               
chr10:53076204-53075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 168
               

               
Conread position:
               
1250-1500
               

               
Cow position:
               
chr10:33732782-33733034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
1250-1500
               

               
Cow position:
               
chr10:37295582-37295829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 168
               

               
Conread position:
               
1251-1389
               

               
Cow position:
               
chr10:36947103-36947243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1251-1493
               

               
Cow position:
               
chr10:6543815-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
103, 178
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr10:19549398-19549655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 178
               

               
Conread position:
               
1252-1382
               

               
Cow position:
               
chr10:49253451-49253324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1252-1422
               

               
Cow position:
               
chr10:53405561-53405385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1252-1465
               

               
Cow position:
               
chr10:8449593-8449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 192
               

               
Conread position:
               
1252-1493
               

               
Cow position:
               
chr10:47651387-47651149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 178
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:11081052-11080795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 185
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:21447821-21448064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
105, 174
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:34430137-34430386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:35901401-35901163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:36002286-36002032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:53357984-53357734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr10:59663884-59664142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1253-1382
               

               
Cow position:
               
chr10:49060630-49060759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr10:5151433-5151184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr10:13586791-13586547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 173
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr10:34174890-34175160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1254-1496
               

               
Cow position:
               
chr10:25699736-25699490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
102, 175
               

               
Conread position:
               
1258-1481
               

               
Cow position:
               
chr10:69997718-69997950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
101, 170
               

               
Conread position:
               
1258-1499
               

               
Cow position:
               
chr10:22321605-22321357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:11213194-11212949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:15318968-15318717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:23936559-23936318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:24763565-24763311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:39875071-39875312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:41802810-41803060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:45770126-45769876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:51696823-51696576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:58259443-58259682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr10:62286639-62286386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 175
               

               
Conread position:
               
1261-1497
               

               
Cow position:
               
chr10:65423825-65424062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
1261-1500
               

               
Cow position:
               
chr10:20897367-20897140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
1262-1496
               

               
Cow position:
               
chr10:57142137-57142374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 152
               

               
Conread position:
               
1263-1396
               

               
Cow position:
               
chr10:6199096-6198963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
1263-1475
               

               
Cow position:
               
chr10:10750173-10750394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
1263-1499
               

               
Cow position:
               
chr10:53973919-53973682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr10:8923357-8923111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr10:27828399-27828164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
94, 135
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr10:35796259-35796489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr10:38014443-38014199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr10:47412029-47412271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
1264-1500
               

               
Cow position:
               
chr10:33067500-33067731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1265-1500
               

               
Cow position:
               
chr10:53934677-53934904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
180, 82
               

               
Conread position:
               
1272-1496
               

               
Cow position:
               
chr10:38725723-38725493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
1272-1500
               

               
Cow position:
               
chr10:5264879-5264654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
1272-1500
               

               
Cow position:
               
chr10:24781257-24781021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 155
               

               
Conread position:
               
1274-1500
               

               
Cow position:
               
chr10:41254507-41254738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
1275-1500
               

               
Cow position:
               
chr10:24307858-24308081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
1276-1500
               

               
Cow position:
               
chr10:805254-805032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
1276-1500
               

               
Cow position:
               
chr10:17176096-17175868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
1276-1500
               

               
Cow position:
               
chr10:42892906-42893131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
1276-1500
               

               
Cow position:
               
chr10:54469329-54469560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 194
               

               
Conread position:
               
1277-1497
               

               
Cow position:
               
chr10:37645123-37644910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1277-1500
               

               
Cow position:
               
chr10:24744609-24744381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1278-1497
               

               
Cow position:
               
chr10:6252434-6252641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
1285-1500
               

               
Cow position:
               
chr10:1428095-1427877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
1286-1499
               

               
Cow position:
               
chr10:59588121-59588333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
1293-1500
               

               
Cow position:
               
chr10:39303799-39304017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1300-1500
               

               
Cow position:
               
chr10:22520120-22520330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
1309-1500
               

               
Cow position:
               
chr10:35857030-35857221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
1311-1497
               

               
Cow position:
               
chr10:57736153-57736325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1322-1500
               

               
Cow position:
               
chr10:35856338-35856516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
1350-1500
               

               
Cow position:
               
chr10:19678864-19678705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 87
               
Show alignments to all cow chromosomes.