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Cow genome map

           
Conread name:
           
Ss1.1-Utr1-UTR010020F01.5.5
        

               
Conread position:
               
1141-1497
               

               
Cow position:
               
chr13:35659510-35659878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
1147-1500
               

               
Cow position:
               
chr13:10845376-10845721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
186, 102
               

               
Conread position:
               
1150-1389
               

               
Cow position:
               
chr13:18181990-18181764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
207, 87
               

               
Conread position:
               
1150-1477
               

               
Cow position:
               
chr13:7265347-7265020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
1153-1454
               

               
Cow position:
               
chr13:13196004-13196323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
1155-1382
               

               
Cow position:
               
chr13:14644819-14645055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
1156-1331
               

               
Cow position:
               
chr13:23823263-23823082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
1156-1346
               

               
Cow position:
               
chr13:10757906-10758095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
1156-1355
               

               
Cow position:
               
chr13:31507675-31507468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1156-1376
               

               
Cow position:
               
chr13:15144066-15143845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
1156-1389
               

               
Cow position:
               
chr13:45439299-45439533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
1156-1484
               

               
Cow position:
               
chr13:19278864-19279203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
1156-1496
               

               
Cow position:
               
chr13:57770215-57769889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
1156-1497
               

               
Cow position:
               
chr13:5758564-5758216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
1156-1497
               

               
Cow position:
               
chr13:21288321-21287962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 282
               

               
Conread position:
               
1156-1497
               

               
Cow position:
               
chr13:25435340-25434995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr13:17114616-17114251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
1157-1490
               

               
Cow position:
               
chr13:15194953-15194614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 94
               

               
Conread position:
               
1158-1466
               

               
Cow position:
               
chr13:18197838-18197509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
1159-1500
               

               
Cow position:
               
chr13:5671815-5671464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
1160-1337
               

               
Cow position:
               
chr13:55713656-55713478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
1160-1344
               

               
Cow position:
               
chr13:57355828-57356007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1160-1500
               

               
Cow position:
               
chr13:15257596-15257254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr13:17021953-17021601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr13:20473903-20473563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 268
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr13:21242304-21241965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 265
               

               
Conread position:
               
1162-1354
               

               
Cow position:
               
chr13:22345501-22345302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1162-1389
               

               
Cow position:
               
chr13:7149009-7149237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
1162-1497
               

               
Cow position:
               
chr13:4665076-4664743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
1163-1488
               

               
Cow position:
               
chr13:6189826-6189500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 155
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr13:151744-152082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr13:52749689-52749350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
1164-1389
               

               
Cow position:
               
chr13:17611777-17611541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1164-1446
               

               
Cow position:
               
chr13:20868971-20868682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
1165-1317
               

               
Cow position:
               
chr13:16106197-16106352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1165-1333
               

               
Cow position:
               
chr13:23399542-23399720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1165-1383
               

               
Cow position:
               
chr13:42849354-42849128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1165-1420
               

               
Cow position:
               
chr13:21171796-21171522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1165-1497
               

               
Cow position:
               
chr13:11808362-11808683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
1165-1498
               

               
Cow position:
               
chr13:26698721-26698371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
1165-1500
               

               
Cow position:
               
chr13:53573752-53574098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
1165-1500
               

               
Cow position:
               
chr13:55674434-55674081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1166-1500
               

               
Cow position:
               
chr13:21106920-21107266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
1168-1500
               

               
Cow position:
               
chr13:24369363-24369708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
1169-1353
               

               
Cow position:
               
chr13:52913656-52913847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1169-1499
               

               
Cow position:
               
chr13:20784374-20784715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 267
               

               
Conread position:
               
1171-1424
               

               
Cow position:
               
chr13:45108619-45108358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
171, 75
               

               
Conread position:
               
1171-1499
               

               
Cow position:
               
chr13:16343492-16343811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
182, 72
               

               
Conread position:
               
1172-1355
               

               
Cow position:
               
chr13:21277674-21277491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1172-1499
               

               
Cow position:
               
chr13:13088815-13089146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
1174-1500
               

               
Cow position:
               
chr13:24585833-24586169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
1175-1348
               

               
Cow position:
               
chr13:11565625-11565806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1175-1382
               

               
Cow position:
               
chr13:55494733-55494522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
1175-1498
               

               
Cow position:
               
chr13:972111-971767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 158
               

               
Conread position:
               
1175-1500
               

               
Cow position:
               
chr13:20217612-20217260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 320
               

               
Conread position:
               
1176-1500
               

               
Cow position:
               
chr13:54389237-54388893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 265
               

               
Conread position:
               
1177-1342
               

               
Cow position:
               
chr13:9687881-9687717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1178-1347
               

               
Cow position:
               
chr13:57322938-57323114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1178-1351
               

               
Cow position:
               
chr13:41155266-41155095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr13:22601897-22601719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr13:37555082-37554898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
1178-1366
               

               
Cow position:
               
chr13:53850609-53850812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1370
               

               
Cow position:
               
chr13:55775152-55775350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
1178-1376
               

               
Cow position:
               
chr13:9161723-9161921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
1178-1376
               

               
Cow position:
               
chr13:21981181-21980978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
1178-1376
               

               
Cow position:
               
chr13:62007896-62008105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1178-1379
               

               
Cow position:
               
chr13:8450122-8450331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1385
               

               
Cow position:
               
chr13:21188171-21188376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
179, 63
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr13:17089724-17089509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr13:19598876-19598654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr13:25504324-25504543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1178-1398
               

               
Cow position:
               
chr13:20314836-20314600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1178-1425
               

               
Cow position:
               
chr13:37614409-37614146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 221
               

               
Conread position:
               
1178-1440
               

               
Cow position:
               
chr13:36876854-36877119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 212
               

               
Conread position:
               
1178-1449
               

               
Cow position:
               
chr13:21170317-21170607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 280
               

               
Conread position:
               
1178-1463
               

               
Cow position:
               
chr13:52477856-52477555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
1178-1476
               

               
Cow position:
               
chr13:49457491-49457777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
200, 66
               

               
Conread position:
               
1178-1495
               

               
Cow position:
               
chr13:22085943-22085621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
1178-1495
               

               
Cow position:
               
chr13:60375699-60375365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 166
               

               
Conread position:
               
1178-1496
               

               
Cow position:
               
chr13:20839369-20839687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
182, 67
               

               
Conread position:
               
1178-1497
               

               
Cow position:
               
chr13:14063732-14063397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 291
               

               
Conread position:
               
1178-1497
               

               
Cow position:
               
chr13:18058458-18058121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr13:15945282-15945604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
187, 69
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr13:23667046-23667381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr13:43479851-43480183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr13:19883245-19882911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:8374972-8374644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:12670663-12670320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:15233735-15234042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:17569308-17568971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:17745047-17745367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 126
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:18166521-18166861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
64, 254
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:19188103-19188429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
183, 61
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:20821048-20820708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 254
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:21235879-21235559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 203
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:24753682-24754009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 251
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:38329407-38329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 272
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:42200409-42200746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
71, 258
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:47007924-47007602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:49023077-49022746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 248
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:54582663-54583005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 136
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:58763820-58763504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr13:61977169-61976837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
1179-1371
               

               
Cow position:
               
chr13:7046670-7046864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
1179-1376
               

               
Cow position:
               
chr13:10210863-10210661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1179-1382
               

               
Cow position:
               
chr13:38035629-38035839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
1179-1496
               

               
Cow position:
               
chr13:20288128-20288454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 156
               

               
Conread position:
               
1179-1499
               

               
Cow position:
               
chr13:14576005-14576334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 196
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr13:6079613-6079291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 250
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr13:15289129-15288801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr13:27525469-27525137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr13:29831637-29831305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
121, 185
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr13:32017726-32017398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 115
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr13:51940536-51940864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
1180-1338
               

               
Cow position:
               
chr13:21426028-21425871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 90
               

               
Conread position:
               
1180-1354
               

               
Cow position:
               
chr13:51249586-51249405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
1180-1355
               

               
Cow position:
               
chr13:52891041-52891209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1180-1366
               

               
Cow position:
               
chr13:49283987-49283792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1180-1373
               

               
Cow position:
               
chr13:33854890-33854690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
1180-1376
               

               
Cow position:
               
chr13:18093078-18092877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
1180-1376
               

               
Cow position:
               
chr13:20519862-20520059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 101
               

               
Conread position:
               
1180-1388
               

               
Cow position:
               
chr13:84382-84588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
1180-1401
               

               
Cow position:
               
chr13:7149708-7149489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
1180-1462
               

               
Cow position:
               
chr13:45073455-45073167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
1180-1480
               

               
Cow position:
               
chr13:20881130-20880818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
1180-1487
               

               
Cow position:
               
chr13:45074112-45073811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
1180-1495
               

               
Cow position:
               
chr13:1568725-1569046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 211
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr13:2803277-2803594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr13:4552617-4552928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr13:25817320-25817647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
1180-1498
               

               
Cow position:
               
chr13:46525638-46525319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr13:17292337-17292006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 163
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr13:34995521-34995201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:6540510-6540184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:6973953-6974291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:12989653-12989972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:13320588-13320912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 253
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:13501820-13501495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:15195410-15195076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:19393087-19393417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:25926579-25926920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 261
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:34261026-34261362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
68, 257
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:34281472-34281804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:41806567-41806903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:51528647-51528319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr13:54701972-54702315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
1181-1389
               

               
Cow position:
               
chr13:35557319-35557100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1181-1396
               

               
Cow position:
               
chr13:57986142-57985920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 214
               

               
Conread position:
               
1181-1497
               

               
Cow position:
               
chr13:15193096-15192765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 167
               

               
Conread position:
               
1182-1344
               

               
Cow position:
               
chr13:33601436-33601266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1182-1389
               

               
Cow position:
               
chr13:56535260-56535466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
172, 76
               

               
Conread position:
               
1182-1394
               

               
Cow position:
               
chr13:52536364-52536581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
1182-1499
               

               
Cow position:
               
chr13:17821465-17821141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 81
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr13:18851881-18852208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
1184-1342
               

               
Cow position:
               
chr13:13265359-13265524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1184-1480
               

               
Cow position:
               
chr13:20534695-20534990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
1185-1500
               

               
Cow position:
               
chr13:48375819-48375517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1187-1500
               

               
Cow position:
               
chr13:12206859-12207171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
1188-1477
               

               
Cow position:
               
chr13:12974614-12974907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 213
               

               
Conread position:
               
1191-1489
               

               
Cow position:
               
chr13:57494371-57494071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
171, 58
               

               
Conread position:
               
1192-1465
               

               
Cow position:
               
chr13:16714463-16714169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
1197-1371
               

               
Cow position:
               
chr13:38012147-38012325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1205-1382
               

               
Cow position:
               
chr13:13211704-13211888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1205-1479
               

               
Cow position:
               
chr13:20154821-20155107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 122
               

               
Conread position:
               
1205-1500
               

               
Cow position:
               
chr13:14927078-14927363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
1205-1500
               

               
Cow position:
               
chr13:40722876-40722576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
1205-1500
               

               
Cow position:
               
chr13:47964357-47964069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
1210-1500
               

               
Cow position:
               
chr13:20666565-20666261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
1210-1500
               

               
Cow position:
               
chr13:23478849-23479154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 296
               

               
Conread position:
               
1213-1378
               

               
Cow position:
               
chr13:29662861-29663027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
1214-1500
               

               
Cow position:
               
chr13:23270366-23270083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 31
               

               
Conread position:
               
1215-1355
               

               
Cow position:
               
chr13:9391389-9391536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1217-1355
               

               
Cow position:
               
chr13:16790041-16790185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1223-1492
               

               
Cow position:
               
chr13:13765634-13765903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
173, 80
               

               
Conread position:
               
1231-1499
               

               
Cow position:
               
chr13:48037474-48037748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
1235-1388
               

               
Cow position:
               
chr13:37621501-37621350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
1241-1475
               

               
Cow position:
               
chr13:47022226-47022462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 188
               

               
Conread position:
               
1241-1500
               

               
Cow position:
               
chr13:53566463-53566723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
1242-1432
               

               
Cow position:
               
chr13:40634727-40634916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 131
               

               
Conread position:
               
1242-1476
               

               
Cow position:
               
chr13:37528090-37527864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 143
               

               
Conread position:
               
1242-1486
               

               
Cow position:
               
chr13:8355068-8355313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
1242-1499
               

               
Cow position:
               
chr13:55316334-55316062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 202
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:547358-547613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:13176514-13176778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:17439905-17439642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 83
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:18696702-18696970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:26261925-26261670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 154
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:35526332-35526083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:38284116-38283858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 163
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr13:51116160-51115900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
1244-1493
               

               
Cow position:
               
chr13:21176454-21176201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
1244-1499
               

               
Cow position:
               
chr13:9265961-9265705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 19
               

               
Conread position:
               
1245-1500
               

               
Cow position:
               
chr13:23960936-23960685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 110
               

               
Conread position:
               
1246-1381
               

               
Cow position:
               
chr13:43525367-43525232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
1246-1389
               

               
Cow position:
               
chr13:3209454-3209310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
1246-1389
               

               
Cow position:
               
chr13:11103333-11103182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1246-1473
               

               
Cow position:
               
chr13:52880997-52880784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
1246-1494
               

               
Cow position:
               
chr13:18172203-18172460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 182
               

               
Conread position:
               
1246-1497
               

               
Cow position:
               
chr13:37803758-37804004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
1246-1500
               

               
Cow position:
               
chr13:6087025-6086776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
1246-1500
               

               
Cow position:
               
chr13:17971162-17970900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
1246-1500
               

               
Cow position:
               
chr13:52057424-52057672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 139
               

               
Conread position:
               
1249-1497
               

               
Cow position:
               
chr13:12449116-12448867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
1249-1498
               

               
Cow position:
               
chr13:20706335-20706080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1249-1498
               

               
Cow position:
               
chr13:43762039-43762295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr13:19022141-19022403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr13:23856081-23856340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 187
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr13:24230084-24230340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
106, 176
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr13:2413900-2414158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
1252-1355
               

               
Cow position:
               
chr13:12237318-12237421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1252-1475
               

               
Cow position:
               
chr13:46329733-46329501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
105, 180
               

               
Conread position:
               
1252-1483
               

               
Cow position:
               
chr13:19320405-19320646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1252-1494
               

               
Cow position:
               
chr13:21136032-21135777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 188
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr13:5082524-5082778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
107, 75
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr13:10929115-10928866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr13:11460506-11460749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 166
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr13:31813748-31813999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr13:11060861-11061115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 160
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr13:17966335-17966081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr13:56155277-56155031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
1254-1395
               

               
Cow position:
               
chr13:31529753-31529894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1254-1490
               

               
Cow position:
               
chr13:15885148-15884902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 171
               

               
Conread position:
               
1254-1500
               

               
Cow position:
               
chr13:37484404-37484146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
103, 178
               

               
Conread position:
               
1257-1500
               

               
Cow position:
               
chr13:17622167-17622409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
1258-1495
               

               
Cow position:
               
chr13:12202241-12202489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1258-1496
               

               
Cow position:
               
chr13:18835083-18835316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr13:9593385-9593636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr13:11381844-11381594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 175
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr13:15144486-15144244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr13:17799959-17800200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr13:20684249-20683993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 184
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr13:40943123-40943372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
1262-1382
               

               
Cow position:
               
chr13:47634390-47634511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1263-1472
               

               
Cow position:
               
chr13:50568521-50568317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
1263-1497
               

               
Cow position:
               
chr13:20679223-20679473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 163
               

               
Conread position:
               
1263-1497
               

               
Cow position:
               
chr13:36771536-36771294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
1263-1497
               

               
Cow position:
               
chr13:37640473-37640711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
1263-1498
               

               
Cow position:
               
chr13:49503648-49503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 164
               

               
Conread position:
               
1263-1499
               

               
Cow position:
               
chr13:890288-890045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
1263-1499
               

               
Cow position:
               
chr13:7663538-7663297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr13:6061124-6060882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 128
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr13:6153900-6153654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 168
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr13:15902908-15903144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 159
               

               
Conread position:
               
1264-1440
               

               
Cow position:
               
chr13:29123189-29123373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 167
               

               
Conread position:
               
1264-1500
               

               
Cow position:
               
chr13:6389281-6389508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1264-1500
               

               
Cow position:
               
chr13:34263485-34263241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 149
               

               
Conread position:
               
1265-1499
               

               
Cow position:
               
chr13:15529151-15528905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1266-1500
               

               
Cow position:
               
chr13:45023322-45023084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
1267-1493
               

               
Cow position:
               
chr13:34555940-34555711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
118, 161
               

               
Conread position:
               
1277-1500
               

               
Cow position:
               
chr13:2404652-2404867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
1278-1500
               

               
Cow position:
               
chr13:18243761-18243991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 154
               

               
Conread position:
               
1293-1500
               

               
Cow position:
               
chr13:25062327-25062536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
1306-1500
               

               
Cow position:
               
chr13:12619188-12618986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
1307-1496
               

               
Cow position:
               
chr13:24376421-24376613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
1310-1498
               

               
Cow position:
               
chr13:10099056-10098865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
1321-1496
               

               
Cow position:
               
chr13:30693656-30693829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
1322-1500
               

               
Cow position:
               
chr13:37521433-37521252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
1341-1500
               

               
Cow position:
               
chr13:12682584-12682417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               
Show alignments to all cow chromosomes.