Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010020F01.5.5 |
| Conread position: | 1110-1499 |
| Cow position: | chr24:43028083-43028488 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 1145-1396 |
| Cow position: | chr24:42175735-42175473 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 1153-1302 |
| Cow position: | chr24:2223023-2223174 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1156-1499 |
| Cow position: | chr24:37650873-37650504 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 289 |
| Conread position: | 1156-1500 |
| Cow position: | chr24:23694717-23695060 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 1156-1500 |
| Cow position: | chr24:24490832-24491177 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 1156-1500 |
| Cow position: | chr24:28303167-28303519 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 93, 250 |
| Conread position: | 1157-1500 |
| Cow position: | chr24:30236067-30235706 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 182 |
| Conread position: | 1158-1378 |
| Cow position: | chr24:18442378-18442600 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1158-1500 |
| Cow position: | chr24:33944599-33944237 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 1161-1381 |
| Cow position: | chr24:28510980-28510755 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 1161-1387 |
| Cow position: | chr24:29984800-29985032 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1161-1389 |
| Cow position: | chr24:22133354-22133121 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 8 |
| Conread position: | 1161-1500 |
| Cow position: | chr24:11887343-11886994 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 1162-1500 |
| Cow position: | chr24:17832640-17832981 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 43, 178 |
| Conread position: | 1163-1331 |
| Cow position: | chr24:41935116-41934955 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1166-1500 |
| Cow position: | chr24:18734195-18734519 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 1168-1389 |
| Cow position: | chr24:28344563-28344335 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 82, 71 |
| Conread position: | 1170-1484 |
| Cow position: | chr24:35675715-35675394 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 1171-1313 |
| Cow position: | chr24:17938861-17938719 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1171-1392 |
| Cow position: | chr24:33244566-33244343 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 44, 201 |
| Conread position: | 1171-1463 |
| Cow position: | chr24:33372726-33372434 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 1171-1488 |
| Cow position: | chr24:4725139-4724818 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 1171-1489 |
| Cow position: | chr24:15057564-15057245 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 1171-1495 |
| Cow position: | chr24:43371425-43371085 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 275 |
| Conread position: | 1171-1500 |
| Cow position: | chr24:16995058-16994719 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 190 |
| Conread position: | 1172-1358 |
| Cow position: | chr24:35029892-35030079 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 1172-1387 |
| Cow position: | chr24:5360890-5360671 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 158 |
| Conread position: | 1172-1392 |
| Cow position: | chr24:37651900-37651672 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1173-1343 |
| Cow position: | chr24:40811846-40811676 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 1173-1397 |
| Cow position: | chr24:6723931-6723709 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 184, 82 |
| Conread position: | 1173-1416 |
| Cow position: | chr24:25122514-25122268 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 1173-1500 |
| Cow position: | chr24:212148-211818 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 186, 78 |
| Conread position: | 1175-1496 |
| Cow position: | chr24:37038067-37037736 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 128, 256 |
| Conread position: | 1177-1382 |
| Cow position: | chr24:42688015-42687805 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 153 |
| Conread position: | 1178-1334 |
| Cow position: | chr24:28255890-28256053 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1178-1353 |
| Cow position: | chr24:22855751-22855572 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 1178-1354 |
| Cow position: | chr24:27940455-27940635 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 1178-1355 |
| Cow position: | chr24:13610474-13610296 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 1178-1365 |
| Cow position: | chr24:3412854-3412657 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1178-1366 |
| Cow position: | chr24:24227518-24227707 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 1178-1378 |
| Cow position: | chr24:42226437-42226234 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 1178-1388 |
| Cow position: | chr24:39238934-39238722 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 1178-1389 |
| Cow position: | chr24:175335-175542 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 179, 56 |
| Conread position: | 1178-1389 |
| Cow position: | chr24:230453-230228 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1178-1389 |
| Cow position: | chr24:13948295-13948073 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 1178-1422 |
| Cow position: | chr24:37823697-37823437 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1178-1440 |
| Cow position: | chr24:13353199-13352931 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 1178-1446 |
| Cow position: | chr24:37974810-37975094 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1178-1449 |
| Cow position: | chr24:20364243-20364523 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 1178-1495 |
| Cow position: | chr24:40301333-40300997 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 120 |
| Conread position: | 1178-1497 |
| Cow position: | chr24:30897389-30897702 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 59 |
| Conread position: | 1178-1497 |
| Cow position: | chr24:36403983-36404308 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 1178-1498 |
| Cow position: | chr24:10499391-10499049 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 72, 158 |
| Conread position: | 1178-1499 |
| Cow position: | chr24:27844360-27844686 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 254 |
| Conread position: | 1178-1499 |
| Cow position: | chr24:41423768-41423443 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:5142111-5141777 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:11840357-11840011 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:18484818-18485164 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:19000216-18999880 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 254 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:27607938-27608265 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:27906611-27906271 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 107 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:31812358-31812021 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 261 |
| Conread position: | 1178-1500 |
| Cow position: | chr24:39483636-39483310 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 79 |
| Conread position: | 1179-1392 |
| Cow position: | chr24:21834791-21835013 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 69, 96 |
| Conread position: | 1180-1372 |
| Cow position: | chr24:7757940-7757739 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1180-1389 |
| Cow position: | chr24:27713239-27713455 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1180-1480 |
| Cow position: | chr24:39849721-39850031 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 153 |
| Conread position: | 1180-1490 |
| Cow position: | chr24:19187103-19186804 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 167 |
| Conread position: | 1180-1499 |
| Cow position: | chr24:16510142-16509804 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:1269948-1269631 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 150 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:2402206-2402541 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 46, 76 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:3165990-3165654 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:17104401-17104737 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:18374935-18374611 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 235 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:30313858-30314199 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 70, 116 |
| Conread position: | 1180-1500 |
| Cow position: | chr24:34396019-34396341 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 1181-1475 |
| Cow position: | chr24:28234211-28233907 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 34, 154 |
| Conread position: | 1181-1499 |
| Cow position: | chr24:17860092-17860421 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 64, 252 |
| Conread position: | 1181-1499 |
| Cow position: | chr24:29539760-29540073 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 69, 153 |
| Conread position: | 1181-1500 |
| Cow position: | chr24:28722047-28721724 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 1182-1376 |
| Cow position: | chr24:43832691-43832492 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1182-1389 |
| Cow position: | chr24:20807693-20807485 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 128 |
| Conread position: | 1182-1490 |
| Cow position: | chr24:7777465-7777773 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 1182-1496 |
| Cow position: | chr24:15246489-15246797 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 1184-1497 |
| Cow position: | chr24:39833371-39833676 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 173, 76 |
| Conread position: | 1184-1498 |
| Cow position: | chr24:6131720-6132038 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 20 |
| Conread position: | 1187-1458 |
| Cow position: | chr24:29561415-29561699 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 1188-1355 |
| Cow position: | chr24:31479396-31479565 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 1188-1486 |
| Cow position: | chr24:38841270-38841557 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 1188-1500 |
| Cow position: | chr24:31036501-31036186 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 106, 9 |
| Conread position: | 1189-1486 |
| Cow position: | chr24:41756012-41755710 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 1191-1389 |
| Cow position: | chr24:41916417-41916203 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1191-1500 |
| Cow position: | chr24:30229634-30229304 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 253 |
| Conread position: | 1193-1500 |
| Cow position: | chr24:31359476-31359159 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 1205-1400 |
| Cow position: | chr24:27740333-27740131 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 1205-1500 |
| Cow position: | chr24:20874826-20874513 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 1214-1489 |
| Cow position: | chr24:32054790-32054503 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 215 |
| Conread position: | 1217-1499 |
| Cow position: | chr24:5754962-5754672 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 1218-1492 |
| Cow position: | chr24:6150139-6149866 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 1232-1500 |
| Cow position: | chr24:27748753-27748480 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 201 |
| Conread position: | 1235-1500 |
| Cow position: | chr24:18356947-18357220 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 119, 226 |
| Conread position: | 1235-1500 |
| Cow position: | chr24:28063052-28062785 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 1242-1397 |
| Cow position: | chr24:27284914-27284763 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 115, 81 |
| Conread position: | 1242-1489 |
| Cow position: | chr24:8006404-8006155 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 1242-1500 |
| Cow position: | chr24:11119375-11119117 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 113, 154 |
| Conread position: | 1242-1500 |
| Cow position: | chr24:31816676-31816422 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 115, 146 |
| Conread position: | 1242-1500 |
| Cow position: | chr24:32204697-32204961 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 162 |
| Conread position: | 1242-1500 |
| Cow position: | chr24:33221834-33222109 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 60, 200 |
| Conread position: | 1242-1500 |
| Cow position: | chr24:34742851-34742588 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 114, 199 |
| Conread position: | 1243-1494 |
| Cow position: | chr24:28319112-28319361 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 114, 138 |
| Conread position: | 1243-1500 |
| Cow position: | chr24:3430830-3430567 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 116, 98 |
| Conread position: | 1246-1392 |
| Cow position: | chr24:27349083-27349227 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 1246-1500 |
| Cow position: | chr24:6912270-6912518 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 111, 139 |
| Conread position: | 1246-1500 |
| Cow position: | chr24:33153871-33153610 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 1248-1486 |
| Cow position: | chr24:27725920-27726168 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 185 |
| Conread position: | 1248-1498 |
| Cow position: | chr24:31324376-31324116 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 1249-1458 |
| Cow position: | chr24:39791632-39791414 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 108, 184 |
| Conread position: | 1249-1481 |
| Cow position: | chr24:24662040-24662277 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 180 |
| Conread position: | 1249-1500 |
| Cow position: | chr24:32071052-32070799 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 1252-1386 |
| Cow position: | chr24:42981674-42981807 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 1252-1389 |
| Cow position: | chr24:28043063-28042925 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1252-1420 |
| Cow position: | chr24:17375726-17375560 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 133 |
| Conread position: | 1252-1498 |
| Cow position: | chr24:28496494-28496748 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1252-1499 |
| Cow position: | chr24:29063570-29063814 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 1252-1500 |
| Cow position: | chr24:27824550-27824291 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 105, 203 |
| Conread position: | 1252-1500 |
| Cow position: | chr24:29673609-29673352 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 1254-1500 |
| Cow position: | chr24:24250808-24250561 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 133, 171 |
| Conread position: | 1254-1500 |
| Cow position: | chr24:29679227-29679474 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 67 |
| Conread position: | 1258-1420 |
| Cow position: | chr24:12077676-12077514 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 127 |
| Conread position: | 1258-1500 |
| Cow position: | chr24:23186837-23187084 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 174 |
| Conread position: | 1258-1500 |
| Cow position: | chr24:33723763-33724012 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 1258-1500 |
| Cow position: | chr24:43927251-43927489 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 67 |
| Conread position: | 1259-1384 |
| Cow position: | chr24:28689749-28689621 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1261-1500 |
| Cow position: | chr24:45005027-45004789 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 1263-1388 |
| Cow position: | chr24:40983207-40983083 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 1263-1488 |
| Cow position: | chr24:43967427-43967656 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 1263-1495 |
| Cow position: | chr24:20943238-20943005 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 1263-1497 |
| Cow position: | chr24:28990638-28990400 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 168 |
| Conread position: | 1263-1500 |
| Cow position: | chr24:15373482-15373242 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 167 |
| Conread position: | 1263-1500 |
| Cow position: | chr24:18970431-18970675 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 82, 158 |
| Conread position: | 1263-1500 |
| Cow position: | chr24:19736257-19736495 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 168 |
| Conread position: | 1264-1497 |
| Cow position: | chr24:201561-201798 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 165 |
| Conread position: | 1273-1500 |
| Cow position: | chr24:29180952-29180721 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 1275-1486 |
| Cow position: | chr24:2675380-2675169 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 94 |
| Conread position: | 1304-1500 |
| Cow position: | chr24:17492334-17492148 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 1330-1500 |
| Cow position: | chr24:35794725-35794903 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 1343-1497 |
| Cow position: | chr24:17363651-17363811 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.