Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010020F01.5.5 |
| Conread position: | 1143-1498 |
| Cow position: | chr25:3993012-3992651 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 196 |
| Conread position: | 1155-1500 |
| Cow position: | chr25:14791975-14791609 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 184 |
| Conread position: | 1156-1500 |
| Cow position: | chr25:22179129-22178776 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 173 |
| Conread position: | 1157-1480 |
| Cow position: | chr25:33457941-33457605 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 1159-1497 |
| Cow position: | chr25:8120995-8120638 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 258 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 90, 154 |
| Conread position: | 1161-1500 |
| Cow position: | chr25:17704949-17704608 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 89, 22 |
| Conread position: | 1162-1500 |
| Cow position: | chr25:14720943-14720610 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 97 |
| Conread position: | 1163-1348 |
| Cow position: | chr25:12223774-12223584 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1163-1366 |
| Cow position: | chr25:23998730-23998929 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 194, 8 |
| Conread position: | 1163-1376 |
| Cow position: | chr25:10364146-10364349 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 192, 16 |
| Conread position: | 1163-1382 |
| Cow position: | chr25:13223106-13222879 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 1163-1500 |
| Cow position: | chr25:14833458-14833803 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 254 |
| Conread position: | 1163-1500 |
| Cow position: | chr25:34768538-34768870 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 230, 83 |
| Conread position: | 1164-1292 |
| Cow position: | chr25:14658916-14659050 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1164-1498 |
| Cow position: | chr25:7641247-7641593 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 78, 7 |
| Conread position: | 1164-1500 |
| Cow position: | chr25:26089618-26089959 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 43 |
| Conread position: | 1165-1382 |
| Cow position: | chr25:26305995-26306225 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1165-1490 |
| Cow position: | chr25:11436616-11436941 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 84 |
| Conread position: | 1165-1500 |
| Cow position: | chr25:4521633-4521979 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 81, 170 |
| Conread position: | 1166-1332 |
| Cow position: | chr25:14210183-14210013 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1166-1376 |
| Cow position: | chr25:26072356-26072572 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 179 |
| Conread position: | 1171-1394 |
| Cow position: | chr25:13823517-13823752 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 125 |
| Conread position: | 1171-1473 |
| Cow position: | chr25:13768165-13767848 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 137 |
| Conread position: | 1171-1499 |
| Cow position: | chr25:22242149-22241835 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 1171-1500 |
| Cow position: | chr25:17975197-17975512 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 78 |
| Conread position: | 1172-1366 |
| Cow position: | chr25:31657079-31657282 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1172-1382 |
| Cow position: | chr25:11823242-11823451 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 1172-1500 |
| Cow position: | chr25:19679553-19679201 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 74, 310 |
| Conread position: | 1173-1381 |
| Cow position: | chr25:36873139-36873353 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 1175-1367 |
| Cow position: | chr25:11760262-11760456 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 154 |
| Conread position: | 1175-1488 |
| Cow position: | chr25:11051720-11051397 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 1175-1500 |
| Cow position: | chr25:14513304-14512966 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 188 |
| Conread position: | 1178-1351 |
| Cow position: | chr25:24115120-24115305 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1178-1355 |
| Cow position: | chr25:15573573-15573395 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 1178-1373 |
| Cow position: | chr25:20203103-20202901 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1178-1376 |
| Cow position: | chr25:35109083-35109284 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1178-1382 |
| Cow position: | chr25:18810526-18810322 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 179, 61 |
| Conread position: | 1178-1389 |
| Cow position: | chr25:18929011-18929220 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 179, 57 |
| Conread position: | 1178-1390 |
| Cow position: | chr25:28667855-28668079 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 1178-1453 |
| Cow position: | chr25:26224841-26225123 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 100 |
| Conread position: | 1178-1467 |
| Cow position: | chr25:7441204-7440920 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 176, 66 |
| Conread position: | 1178-1480 |
| Cow position: | chr25:4489098-4488795 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 1178-1489 |
| Cow position: | chr25:20523043-20523364 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 1178-1491 |
| Cow position: | chr25:12509826-12510145 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1178-1492 |
| Cow position: | chr25:4245860-4245553 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 66, 126 |
| Conread position: | 1178-1492 |
| Cow position: | chr25:6928321-6928645 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 295 |
| Conread position: | 1178-1497 |
| Cow position: | chr25:24669257-24669578 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 127 |
| Conread position: | 1178-1499 |
| Cow position: | chr25:4681400-4681093 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 181, 67 |
| Conread position: | 1178-1499 |
| Cow position: | chr25:7306485-7306158 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:2111231-2110932 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 84, 142 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:7750642-7750311 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:8576869-8576548 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 179, 65 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:12778366-12778673 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 185, 19 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:15273859-15273544 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 62, 209 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:16318955-16319275 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:18720932-18721260 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 185 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:19130049-19129708 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 68, 105 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:21191672-21191346 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:21893529-21893193 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 266 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:26524157-26523820 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 179 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:26679422-26679083 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 257 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:26701215-26700892 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 109 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:35348101-35347763 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 165 |
| Conread position: | 1178-1500 |
| Cow position: | chr25:41150769-41151105 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 72, 256 |
| Conread position: | 1179-1389 |
| Cow position: | chr25:5637195-5637413 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 1179-1500 |
| Cow position: | chr25:7217011-7216686 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 71, 148 |
| Conread position: | 1179-1500 |
| Cow position: | chr25:32277422-32277744 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 1179-1500 |
| Cow position: | chr25:36746254-36746587 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 67, 125 |
| Conread position: | 1180-1321 |
| Cow position: | chr25:13565141-13565282 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 125 |
| Conread position: | 1180-1335 |
| Cow position: | chr25:15553092-15552937 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 102 |
| Conread position: | 1180-1337 |
| Cow position: | chr25:20063453-20063299 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 1180-1350 |
| Cow position: | chr25:31926191-31926365 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1180-1354 |
| Cow position: | chr25:15349716-15349897 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 134 |
| Conread position: | 1180-1374 |
| Cow position: | chr25:9573942-9574143 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 139 |
| Conread position: | 1180-1374 |
| Cow position: | chr25:30852958-30852755 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 200 |
| Conread position: | 1180-1378 |
| Cow position: | chr25:13826624-13826418 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1180-1406 |
| Cow position: | chr25:18288577-18288815 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 173 |
| Conread position: | 1180-1487 |
| Cow position: | chr25:20076672-20076361 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 177, 77 |
| Conread position: | 1180-1488 |
| Cow position: | chr25:24573251-24572936 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 1180-1500 |
| Cow position: | chr25:13272762-13272428 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1180-1500 |
| Cow position: | chr25:21668441-21668101 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 70, 259 |
| Conread position: | 1180-1500 |
| Cow position: | chr25:22315397-22315058 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 75, 234 |
| Conread position: | 1180-1500 |
| Cow position: | chr25:36082061-36081732 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 12, 181 |
| Conread position: | 1181-1499 |
| Cow position: | chr25:33550703-33550365 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 259 |
| Conread position: | 1181-1500 |
| Cow position: | chr25:20008326-20007990 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 69, 259 |
| Conread position: | 1182-1388 |
| Cow position: | chr25:1840512-1840297 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1182-1397 |
| Cow position: | chr25:22298823-22298601 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1182-1491 |
| Cow position: | chr25:19363869-19364194 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 72, 259 |
| Conread position: | 1182-1498 |
| Cow position: | chr25:12755300-12755635 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 82 |
| Conread position: | 1185-1390 |
| Cow position: | chr25:35339002-35339220 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1188-1499 |
| Cow position: | chr25:20023209-20023533 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 45 |
| Conread position: | 1191-1499 |
| Cow position: | chr25:23244822-23245153 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 253 |
| Conread position: | 1191-1500 |
| Cow position: | chr25:11661648-11661961 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 1192-1500 |
| Cow position: | chr25:2624975-2624664 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 60, 141 |
| Conread position: | 1192-1500 |
| Cow position: | chr25:17190573-17190885 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 1194-1389 |
| Cow position: | chr25:9107350-9107552 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1206-1500 |
| Cow position: | chr25:15715039-15714740 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 230 |
| Conread position: | 1215-1500 |
| Cow position: | chr25:21245460-21245752 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 144, 20 |
| Conread position: | 1221-1500 |
| Cow position: | chr25:20461241-20460982 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1223-1500 |
| Cow position: | chr25:21894748-21895031 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 28 |
| Conread position: | 1230-1392 |
| Cow position: | chr25:6227168-6227005 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 152 |
| Conread position: | 1231-1500 |
| Cow position: | chr25:12116864-12117133 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 173 |
| Conread position: | 1237-1500 |
| Cow position: | chr25:1838365-1838092 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 1242-1378 |
| Cow position: | chr25:3744626-3744762 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 1242-1392 |
| Cow position: | chr25:28597490-28597643 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1242-1395 |
| Cow position: | chr25:30624963-30625117 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1242-1431 |
| Cow position: | chr25:40931393-40931201 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 115, 98 |
| Conread position: | 1242-1453 |
| Cow position: | chr25:23745380-23745165 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 187 |
| Conread position: | 1242-1498 |
| Cow position: | chr25:14196981-14196717 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 112, 48 |
| Conread position: | 1242-1499 |
| Cow position: | chr25:16921676-16921934 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 1242-1500 |
| Cow position: | chr25:7673421-7673135 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1242-1500 |
| Cow position: | chr25:20785469-20785729 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 1242-1500 |
| Cow position: | chr25:23829009-23829264 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 1242-1500 |
| Cow position: | chr25:34170064-34169809 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 1243-1446 |
| Cow position: | chr25:4948081-4947872 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 182 |
| Conread position: | 1243-1496 |
| Cow position: | chr25:27531152-27531413 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 195 |
| Conread position: | 1246-1388 |
| Cow position: | chr25:15463703-15463561 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 140 |
| Conread position: | 1246-1421 |
| Cow position: | chr25:7012541-7012360 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 1246-1440 |
| Cow position: | chr25:7799663-7799468 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 1246-1497 |
| Cow position: | chr25:9989993-9990234 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 1248-1498 |
| Cow position: | chr25:30064799-30065023 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1249-1366 |
| Cow position: | chr25:34967396-34967514 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1249-1389 |
| Cow position: | chr25:22348350-22348491 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1249-1488 |
| Cow position: | chr25:9843289-9843043 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1249-1497 |
| Cow position: | chr25:13443297-13443551 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 121 |
| Conread position: | 1249-1498 |
| Cow position: | chr25:30619176-30618923 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 91 |
| Conread position: | 1249-1499 |
| Cow position: | chr25:28187832-28188092 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1249-1500 |
| Cow position: | chr25:7581314-7581569 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 183 |
| Conread position: | 1251-1500 |
| Cow position: | chr25:7380728-7380985 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 188 |
| Conread position: | 1252-1381 |
| Cow position: | chr25:23505162-23505032 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1252-1396 |
| Cow position: | chr25:7379037-7379181 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 134 |
| Conread position: | 1252-1401 |
| Cow position: | chr25:4221493-4221642 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 140 |
| Conread position: | 1252-1473 |
| Cow position: | chr25:13567078-13566844 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 105, 180 |
| Conread position: | 1252-1498 |
| Cow position: | chr25:15254238-15254474 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 105, 133 |
| Conread position: | 1252-1500 |
| Cow position: | chr25:8961880-8961629 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 84 |
| Conread position: | 1252-1500 |
| Cow position: | chr25:22750897-22751154 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 179 |
| Conread position: | 1254-1498 |
| Cow position: | chr25:7008021-7007772 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 154 |
| Conread position: | 1258-1488 |
| Cow position: | chr25:6682958-6683195 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 99, 170 |
| Conread position: | 1258-1498 |
| Cow position: | chr25:25051273-25051524 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1258-1499 |
| Cow position: | chr25:19478779-19478548 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 134 |
| Conread position: | 1258-1500 |
| Cow position: | chr25:6961049-6961298 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 99, 173 |
| Conread position: | 1258-1500 |
| Cow position: | chr25:12609444-12609200 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 67 |
| Conread position: | 1258-1500 |
| Cow position: | chr25:30279104-30279348 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 143 |
| Conread position: | 1263-1382 |
| Cow position: | chr25:6133992-6134111 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 1263-1500 |
| Cow position: | chr25:4547619-4547861 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 91, 131 |
| Conread position: | 1263-1500 |
| Cow position: | chr25:26238961-26238726 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 76, 126 |
| Conread position: | 1263-1500 |
| Cow position: | chr25:32191753-32191526 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 1263-1500 |
| Cow position: | chr25:36036680-36036925 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1264-1474 |
| Cow position: | chr25:14809371-14809161 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 93, 134 |
| Conread position: | 1264-1488 |
| Cow position: | chr25:14157723-14157489 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 166 |
| Conread position: | 1272-1399 |
| Cow position: | chr25:14211719-14211589 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1272-1500 |
| Cow position: | chr25:15377416-15377183 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 53 |
| Conread position: | 1276-1500 |
| Cow position: | chr25:22296940-22297163 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 1300-1496 |
| Cow position: | chr25:16570664-16570474 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 1306-1488 |
| Cow position: | chr25:7449856-7449675 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 113 |
Show alignments to all cow chromosomes.