Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010020F01.5.5 |
| Conread position: | 1131-1394 |
| Cow position: | chr27:27055008-27055272 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 115, 199 |
| Conread position: | 1134-1499 |
| Cow position: | chr27:10992091-10992452 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 1146-1332 |
| Cow position: | chr27:178592-178787 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 1146-1355 |
| Cow position: | chr27:16872204-16871996 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 1154-1378 |
| Cow position: | chr27:13204201-13204430 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 1156-1355 |
| Cow position: | chr27:11133826-11134033 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 1156-1497 |
| Cow position: | chr27:22035634-22035281 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 1157-1343 |
| Cow position: | chr27:22497766-22497957 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1157-1500 |
| Cow position: | chr27:19387760-19388113 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 1159-1499 |
| Cow position: | chr27:31231338-31230995 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 1161-1499 |
| Cow position: | chr27:22547648-22547310 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 1162-1354 |
| Cow position: | chr27:24358082-24358279 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 1162-1497 |
| Cow position: | chr27:15453955-15454307 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 1163-1348 |
| Cow position: | chr27:6151058-6151238 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1163-1351 |
| Cow position: | chr27:31004686-31004878 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 1163-1355 |
| Cow position: | chr27:2949574-2949380 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 1163-1376 |
| Cow position: | chr27:20517395-20517627 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1163-1498 |
| Cow position: | chr27:23594063-23594413 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 87, 169 |
| Conread position: | 1163-1500 |
| Cow position: | chr27:16284233-16284568 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 76 |
| Conread position: | 1163-1500 |
| Cow position: | chr27:24477170-24477512 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 87, 225 |
| Conread position: | 1163-1500 |
| Cow position: | chr27:27632848-27632511 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 1164-1371 |
| Cow position: | chr27:31210295-31210511 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 122 |
| Conread position: | 1165-1500 |
| Cow position: | chr27:299628-299288 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 83, 69 |
| Conread position: | 1166-1366 |
| Cow position: | chr27:20770769-20770569 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 191, 54 |
| Conread position: | 1168-1415 |
| Cow position: | chr27:15003230-15002971 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 82, 165 |
| Conread position: | 1171-1500 |
| Cow position: | chr27:12596534-12596864 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 1172-1488 |
| Cow position: | chr27:27613845-27613549 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 138, 77 |
| Conread position: | 1175-1345 |
| Cow position: | chr27:20325113-20325288 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1178-1317 |
| Cow position: | chr27:21448063-21447920 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1178-1355 |
| Cow position: | chr27:4398726-4398544 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1178-1355 |
| Cow position: | chr27:16047728-16047551 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 1178-1355 |
| Cow position: | chr27:19741632-19741461 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1178-1355 |
| Cow position: | chr27:24693177-24693360 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 138 |
| Conread position: | 1178-1365 |
| Cow position: | chr27:19576564-19576365 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1178-1374 |
| Cow position: | chr27:6162644-6162443 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1178-1375 |
| Cow position: | chr27:22245401-22245594 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 177, 6 |
| Conread position: | 1178-1380 |
| Cow position: | chr27:18435371-18435160 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1178-1382 |
| Cow position: | chr27:31556853-31557052 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 176, 32 |
| Conread position: | 1178-1383 |
| Cow position: | chr27:24223714-24223928 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 1178-1388 |
| Cow position: | chr27:19508771-19508993 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 61, 220 |
| Conread position: | 1178-1389 |
| Cow position: | chr27:7343669-7343446 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 1178-1395 |
| Cow position: | chr27:31169346-31169122 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 109 |
| Conread position: | 1178-1396 |
| Cow position: | chr27:26617174-26617395 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1178-1468 |
| Cow position: | chr27:23452222-23452526 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 68, 171 |
| Conread position: | 1178-1477 |
| Cow position: | chr27:4944747-4944442 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 228 |
| Conread position: | 1178-1496 |
| Cow position: | chr27:20093054-20092743 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 71 |
| Conread position: | 1178-1497 |
| Cow position: | chr27:8353254-8353569 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 1178-1498 |
| Cow position: | chr27:426729-427066 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 70, 164 |
| Conread position: | 1178-1498 |
| Cow position: | chr27:14670621-14670287 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1178-1499 |
| Cow position: | chr27:22171061-22171398 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 156 |
| Conread position: | 1178-1499 |
| Cow position: | chr27:29504871-29504549 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 179, 66 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:7412152-7412478 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 258 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:15669015-15668671 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 71, 259 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:17397692-17397351 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 259 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:20283403-20283741 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 231 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:20828945-20828613 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:21669353-21669024 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 250 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:22386647-22386969 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:26087079-26087395 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:27856098-27856430 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 1178-1500 |
| Cow position: | chr27:30890060-30890386 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 79, 104 |
| Conread position: | 1179-1351 |
| Cow position: | chr27:1067336-1067511 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 1180-1364 |
| Cow position: | chr27:20888496-20888677 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 169, 70 |
| Conread position: | 1180-1382 |
| Cow position: | chr27:7425427-7425213 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1180-1495 |
| Cow position: | chr27:26643464-26643772 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 174, 30 |
| Conread position: | 1180-1498 |
| Cow position: | chr27:28206565-28206891 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 169 |
| Conread position: | 1180-1499 |
| Cow position: | chr27:2957178-2957499 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 146 |
| Conread position: | 1180-1500 |
| Cow position: | chr27:3306547-3306869 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 175, 156 |
| Conread position: | 1180-1500 |
| Cow position: | chr27:14343674-14343367 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 136, 38 |
| Conread position: | 1180-1500 |
| Cow position: | chr27:22220311-22220649 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 263 |
| Conread position: | 1180-1500 |
| Cow position: | chr27:28190430-28190118 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 1180-1500 |
| Cow position: | chr27:29494137-29493813 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 1181-1382 |
| Cow position: | chr27:6106469-6106675 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 1181-1500 |
| Cow position: | chr27:20354362-20354683 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 1182-1496 |
| Cow position: | chr27:29431239-29431552 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 156 |
| Conread position: | 1183-1500 |
| Cow position: | chr27:26865344-26865021 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 126 |
| Conread position: | 1184-1390 |
| Cow position: | chr27:6319687-6319902 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1184-1500 |
| Cow position: | chr27:15409260-15408944 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 244 |
| Conread position: | 1184-1500 |
| Cow position: | chr27:16705018-16705346 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 182 |
| Conread position: | 1185-1338 |
| Cow position: | chr27:31031233-31031385 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 1185-1500 |
| Cow position: | chr27:4858853-4858547 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 174, 64 |
| Conread position: | 1187-1468 |
| Cow position: | chr27:23560261-23559964 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 249 |
| Conread position: | 1191-1499 |
| Cow position: | chr27:19685938-19685613 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 1192-1500 |
| Cow position: | chr27:435005-435334 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 70, 200 |
| Conread position: | 1197-1352 |
| Cow position: | chr27:21025471-21025630 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1198-1389 |
| Cow position: | chr27:28478363-28478562 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1205-1335 |
| Cow position: | chr27:641251-641118 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1209-1499 |
| Cow position: | chr27:20481566-20481279 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 1214-1380 |
| Cow position: | chr27:20812710-20812878 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1215-1500 |
| Cow position: | chr27:18593089-18593366 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 167, 36 |
| Conread position: | 1216-1500 |
| Cow position: | chr27:19546703-19546407 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 1241-1387 |
| Cow position: | chr27:4720279-4720135 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 113, 84 |
| Conread position: | 1241-1500 |
| Cow position: | chr27:26999587-26999320 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 1242-1374 |
| Cow position: | chr27:26323283-26323415 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1242-1405 |
| Cow position: | chr27:30489576-30489413 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 115, 150 |
| Conread position: | 1242-1424 |
| Cow position: | chr27:12710081-12710267 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 1242-1488 |
| Cow position: | chr27:27694934-27694684 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1242-1492 |
| Cow position: | chr27:6541466-6541720 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 190 |
| Conread position: | 1242-1494 |
| Cow position: | chr27:26506579-26506816 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 149, 83 |
| Conread position: | 1242-1498 |
| Cow position: | chr27:20068141-20067881 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 1242-1498 |
| Cow position: | chr27:31148596-31148858 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 1242-1500 |
| Cow position: | chr27:4672846-4673118 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 200 |
| Conread position: | 1242-1500 |
| Cow position: | chr27:16589868-16589616 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 115, 143 |
| Conread position: | 1242-1500 |
| Cow position: | chr27:17331337-17331598 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 1242-1500 |
| Cow position: | chr27:27136686-27136420 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 1242-1500 |
| Cow position: | chr27:30359241-30359503 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 113, 235 |
| Conread position: | 1243-1489 |
| Cow position: | chr27:16780705-16780956 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 1246-1496 |
| Cow position: | chr27:22179928-22179699 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 1246-1497 |
| Cow position: | chr27:30407198-30406941 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1246-1500 |
| Cow position: | chr27:1768785-1768528 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 111, 102 |
| Conread position: | 1246-1500 |
| Cow position: | chr27:7212875-7212618 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 108, 182 |
| Conread position: | 1249-1374 |
| Cow position: | chr27:11466623-11466498 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 1249-1500 |
| Cow position: | chr27:27460729-27460476 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 56 |
| Conread position: | 1251-1499 |
| Cow position: | chr27:4835764-4835513 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 179 |
| Conread position: | 1252-1378 |
| Cow position: | chr27:237114-237240 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 1252-1496 |
| Cow position: | chr27:20758185-20757957 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 1252-1497 |
| Cow position: | chr27:6550308-6550553 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 89 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:20549866-20549609 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:20641489-20641242 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 38 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:20795637-20795886 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:22418922-22418669 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 130, 105 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:22454932-22454678 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:24371087-24371334 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 1252-1500 |
| Cow position: | chr27:26581592-26581336 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 103, 185 |
| Conread position: | 1253-1409 |
| Cow position: | chr27:788953-788794 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1253-1498 |
| Cow position: | chr27:26238871-26239122 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 1253-1500 |
| Cow position: | chr27:1498160-1498416 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 1254-1485 |
| Cow position: | chr27:26407313-26407080 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 1258-1500 |
| Cow position: | chr27:1122882-1123130 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 1259-1500 |
| Cow position: | chr27:28496519-28496279 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 98, 45 |
| Conread position: | 1260-1497 |
| Cow position: | chr27:24014887-24014644 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 179 |
| Conread position: | 1263-1441 |
| Cow position: | chr27:20628924-20629106 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1263-1495 |
| Cow position: | chr27:23510838-23511084 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 1263-1497 |
| Cow position: | chr27:20553587-20553816 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 156 |
| Conread position: | 1263-1498 |
| Cow position: | chr27:22569640-22569869 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 1263-1500 |
| Cow position: | chr27:6073785-6074020 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 1263-1500 |
| Cow position: | chr27:26150873-26151120 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1264-1479 |
| Cow position: | chr27:24738944-24738713 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1264-1499 |
| Cow position: | chr27:20656763-20656536 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 1264-1500 |
| Cow position: | chr27:12191622-12191390 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 91, 107 |
| Conread position: | 1264-1500 |
| Cow position: | chr27:30354488-30354244 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 164 |
| Conread position: | 1265-1500 |
| Cow position: | chr27:27245497-27245254 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 1271-1500 |
| Cow position: | chr27:30550853-30551096 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1272-1497 |
| Cow position: | chr27:4806037-4805813 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 1272-1500 |
| Cow position: | chr27:4813019-4812781 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 164 |
| Conread position: | 1277-1463 |
| Cow position: | chr27:8405953-8405763 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 150 |
| Conread position: | 1291-1500 |
| Cow position: | chr27:815245-815465 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 1295-1500 |
| Cow position: | chr27:3784-3983 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 145, 96 |
Show alignments to all cow chromosomes.