Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010020F01.5.5 |
| Conread position: | 1139-1440 |
| Cow position: | chr29:20770582-20770259 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 201 |
| Conread position: | 1148-1498 |
| Cow position: | chr29:31929213-31928839 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1149-1500 |
| Cow position: | chr29:35501442-35501795 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 1156-1386 |
| Cow position: | chr29:6686434-6686657 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 1156-1500 |
| Cow position: | chr29:9709910-9709552 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 1156-1500 |
| Cow position: | chr29:17154984-17154623 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 1156-1500 |
| Cow position: | chr29:19949524-19949169 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 25, 180 |
| Conread position: | 1156-1500 |
| Cow position: | chr29:44681913-44682241 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 1158-1500 |
| Cow position: | chr29:42363805-42364158 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 1160-1389 |
| Cow position: | chr29:22166873-22167106 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1161-1381 |
| Cow position: | chr29:7290982-7290756 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 1161-1500 |
| Cow position: | chr29:26275813-26275473 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 1162-1351 |
| Cow position: | chr29:3293154-3292959 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 1162-1376 |
| Cow position: | chr29:9378849-9378622 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1163-1358 |
| Cow position: | chr29:8190005-8190196 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1163-1388 |
| Cow position: | chr29:17804740-17804508 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 1163-1389 |
| Cow position: | chr29:28066691-28066463 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 1163-1481 |
| Cow position: | chr29:8862288-8862603 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 182, 83 |
| Conread position: | 1163-1499 |
| Cow position: | chr29:22162051-22162396 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 1163-1500 |
| Cow position: | chr29:10839150-10838806 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 151 |
| Conread position: | 1163-1500 |
| Cow position: | chr29:17110166-17109824 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 1165-1354 |
| Cow position: | chr29:9622499-9622684 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1165-1497 |
| Cow position: | chr29:16309933-16309601 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 1171-1352 |
| Cow position: | chr29:40350877-40351065 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 1171-1368 |
| Cow position: | chr29:15798154-15797945 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 1173-1342 |
| Cow position: | chr29:936404-936227 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1173-1500 |
| Cow position: | chr29:40117766-40117428 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 138 |
| Conread position: | 1178-1308 |
| Cow position: | chr29:25669279-25669148 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1178-1334 |
| Cow position: | chr29:12440959-12440809 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 1178-1374 |
| Cow position: | chr29:36781114-36781317 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1178-1375 |
| Cow position: | chr29:29308386-29308586 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1178-1398 |
| Cow position: | chr29:36952116-36952333 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 1178-1415 |
| Cow position: | chr29:41112694-41112936 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 1178-1466 |
| Cow position: | chr29:7624361-7624074 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 1178-1473 |
| Cow position: | chr29:5063339-5063031 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 72, 261 |
| Conread position: | 1178-1493 |
| Cow position: | chr29:26615545-26615859 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 1178-1495 |
| Cow position: | chr29:28979320-28979622 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 1178-1496 |
| Cow position: | chr29:40763500-40763818 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 199 |
| Conread position: | 1178-1497 |
| Cow position: | chr29:28195337-28195655 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 204, 158 |
| Conread position: | 1178-1498 |
| Cow position: | chr29:22028765-22029081 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 72, 153 |
| Conread position: | 1178-1498 |
| Cow position: | chr29:22613617-22613284 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 1178-1499 |
| Cow position: | chr29:4520526-4520192 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 1178-1500 |
| Cow position: | chr29:732806-732477 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 1178-1500 |
| Cow position: | chr29:4874694-4875037 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 72, 117 |
| Conread position: | 1178-1500 |
| Cow position: | chr29:11434308-11433978 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 1178-1500 |
| Cow position: | chr29:29769158-29769495 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 157 |
| Conread position: | 1178-1500 |
| Cow position: | chr29:36531062-36530723 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 260 |
| Conread position: | 1178-1500 |
| Cow position: | chr29:41811413-41811726 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 176, 19 |
| Conread position: | 1179-1500 |
| Cow position: | chr29:3711571-3711241 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 187 |
| Conread position: | 1179-1500 |
| Cow position: | chr29:25092299-25091968 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 199 |
| Conread position: | 1179-1500 |
| Cow position: | chr29:35292281-35291946 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1180-1328 |
| Cow position: | chr29:24660871-24660720 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 1180-1341 |
| Cow position: | chr29:17282255-17282089 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 1180-1365 |
| Cow position: | chr29:26540346-26540544 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1180-1372 |
| Cow position: | chr29:19363902-19363700 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 70, 153 |
| Conread position: | 1180-1376 |
| Cow position: | chr29:4070814-4070613 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 164 |
| Conread position: | 1180-1468 |
| Cow position: | chr29:7310857-7310576 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 1180-1475 |
| Cow position: | chr29:12625804-12626098 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 175, 71 |
| Conread position: | 1180-1496 |
| Cow position: | chr29:28196826-28197146 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 1180-1498 |
| Cow position: | chr29:4085490-4085177 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 1180-1498 |
| Cow position: | chr29:31593963-31594272 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 70, 104 |
| Conread position: | 1180-1500 |
| Cow position: | chr29:19762457-19762132 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 1180-1500 |
| Cow position: | chr29:24952881-24952544 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 133 |
| Conread position: | 1180-1500 |
| Cow position: | chr29:25737226-25737562 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 1181-1389 |
| Cow position: | chr29:39038076-39038297 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1181-1458 |
| Cow position: | chr29:26779069-26778778 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 65, 164 |
| Conread position: | 1181-1498 |
| Cow position: | chr29:34773556-34773876 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 1181-1498 |
| Cow position: | chr29:43099556-43099886 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 1181-1500 |
| Cow position: | chr29:12680351-12680014 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 64, 265 |
| Conread position: | 1181-1500 |
| Cow position: | chr29:18021509-18021824 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 61 |
| Conread position: | 1182-1397 |
| Cow position: | chr29:44139053-44139279 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 130 |
| Conread position: | 1182-1499 |
| Cow position: | chr29:34359632-34359945 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 205 |
| Conread position: | 1184-1420 |
| Cow position: | chr29:38979890-38980137 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 1186-1353 |
| Cow position: | chr29:4423262-4423430 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1187-1500 |
| Cow position: | chr29:39111137-39111459 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 172, 113 |
| Conread position: | 1188-1446 |
| Cow position: | chr29:32197880-32197618 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 206 |
| Conread position: | 1191-1332 |
| Cow position: | chr29:30206696-30206839 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 1192-1493 |
| Cow position: | chr29:31944050-31943743 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 208 |
| Conread position: | 1193-1381 |
| Cow position: | chr29:23825031-23825230 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1197-1499 |
| Cow position: | chr29:43008916-43009225 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 238 |
| Conread position: | 1197-1500 |
| Cow position: | chr29:10456403-10456703 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 162, 58 |
| Conread position: | 1202-1382 |
| Cow position: | chr29:22723771-22723580 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1205-1413 |
| Cow position: | chr29:742501-742700 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 152, 32 |
| Conread position: | 1210-1420 |
| Cow position: | chr29:32176832-32176613 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 1214-1499 |
| Cow position: | chr29:27826665-27826383 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 1223-1378 |
| Cow position: | chr29:683352-683507 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 1224-1382 |
| Cow position: | chr29:18012695-18012537 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 1232-1500 |
| Cow position: | chr29:11053730-11054004 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 1238-1493 |
| Cow position: | chr29:4003016-4002759 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 93, 165 |
| Conread position: | 1239-1498 |
| Cow position: | chr29:356445-356183 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 189 |
| Conread position: | 1241-1389 |
| Cow position: | chr29:21285480-21285332 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 1241-1485 |
| Cow position: | chr29:34358857-34359109 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 116, 187 |
| Conread position: | 1241-1496 |
| Cow position: | chr29:39567803-39567547 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 116, 95 |
| Conread position: | 1242-1355 |
| Cow position: | chr29:17022270-17022157 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1242-1389 |
| Cow position: | chr29:28840276-28840128 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1242-1500 |
| Cow position: | chr29:13639246-13639514 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1242-1500 |
| Cow position: | chr29:22175801-22175544 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 1242-1500 |
| Cow position: | chr29:23243758-23244024 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 127 |
| Conread position: | 1242-1500 |
| Cow position: | chr29:24624369-24624107 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 1242-1500 |
| Cow position: | chr29:39329483-39329738 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 141 |
| Conread position: | 1245-1500 |
| Cow position: | chr29:5892962-5892706 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 109, 138 |
| Conread position: | 1246-1499 |
| Cow position: | chr29:27589039-27588780 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 111, 119 |
| Conread position: | 1246-1500 |
| Cow position: | chr29:20903174-20903428 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 111, 180 |
| Conread position: | 1249-1392 |
| Cow position: | chr29:34687948-34687804 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1249-1461 |
| Cow position: | chr29:8926348-8926568 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 108, 184 |
| Conread position: | 1249-1500 |
| Cow position: | chr29:1325552-1325297 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 87 |
| Conread position: | 1249-1500 |
| Cow position: | chr29:4480060-4480316 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 136, 103 |
| Conread position: | 1249-1500 |
| Cow position: | chr29:32210958-32211200 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 112, 75 |
| Conread position: | 1249-1500 |
| Cow position: | chr29:36210251-36210018 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 1249-1500 |
| Cow position: | chr29:36217225-36216973 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 76 |
| Conread position: | 1249-1500 |
| Cow position: | chr29:40298907-40299156 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 177 |
| Conread position: | 1251-1392 |
| Cow position: | chr29:31200369-31200227 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1251-1495 |
| Cow position: | chr29:27330001-27329753 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 1252-1382 |
| Cow position: | chr29:23220391-23220520 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 1252-1396 |
| Cow position: | chr29:22734998-22735140 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 73 |
| Conread position: | 1252-1424 |
| Cow position: | chr29:29324316-29324484 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 1252-1486 |
| Cow position: | chr29:29176507-29176745 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 130, 79 |
| Conread position: | 1252-1495 |
| Cow position: | chr29:26559136-26559381 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 105, 78 |
| Conread position: | 1252-1498 |
| Cow position: | chr29:28166112-28166355 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 127, 94 |
| Conread position: | 1252-1500 |
| Cow position: | chr29:10156196-10156449 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 1252-1500 |
| Cow position: | chr29:11397817-11398067 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 1253-1387 |
| Cow position: | chr29:11527683-11527815 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 72 |
| Conread position: | 1253-1497 |
| Cow position: | chr29:10235025-10235270 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 89 |
| Conread position: | 1253-1500 |
| Cow position: | chr29:1557042-1556788 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 123 |
| Conread position: | 1254-1488 |
| Cow position: | chr29:45005521-45005757 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 130, 97 |
| Conread position: | 1258-1389 |
| Cow position: | chr29:23155330-23155200 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1258-1500 |
| Cow position: | chr29:29314544-29314799 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 1263-1389 |
| Cow position: | chr29:40874110-40873983 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1263-1458 |
| Cow position: | chr29:24578962-24578756 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 164 |
| Conread position: | 1263-1499 |
| Cow position: | chr29:5098667-5098903 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 119 |
| Conread position: | 1263-1500 |
| Cow position: | chr29:28446157-28446400 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 1264-1500 |
| Cow position: | chr29:5186395-5186639 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 165 |
| Conread position: | 1265-1498 |
| Cow position: | chr29:23983858-23984101 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1277-1497 |
| Cow position: | chr29:11562698-11562474 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 1278-1500 |
| Cow position: | chr29:26985311-26985084 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 1281-1498 |
| Cow position: | chr29:31674712-31674488 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 1281-1500 |
| Cow position: | chr29:3100186-3100402 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 1285-1495 |
| Cow position: | chr29:26672834-26673045 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 134 |
| Conread position: | 1287-1500 |
| Cow position: | chr29:22714648-22714868 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 143 |
| Conread position: | 1287-1500 |
| Cow position: | chr29:40166319-40166101 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 142 |
| Conread position: | 1291-1500 |
| Cow position: | chr29:29975109-29974900 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 1317-1496 |
| Cow position: | chr29:1124700-1124515 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 1336-1500 |
| Cow position: | chr29:21000657-21000499 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.