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Cow genome map

           
Conread name:
           
Ss1.1-Utr1-UTR010020F01.5.5
        

               
Conread position:
               
1144-1461
               

               
Cow position:
               
chr6:60468505-60468173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
1147-1500
               

               
Cow position:
               
chr6:23696259-23695891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
1152-1500
               

               
Cow position:
               
chr6:17414187-17414551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
1154-1498
               

               
Cow position:
               
chr6:38640491-38640130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
1156-1312
               

               
Cow position:
               
chr6:11263001-11262838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1156-1335
               

               
Cow position:
               
chr6:5600607-5600792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
1156-1372
               

               
Cow position:
               
chr6:16091156-16090934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr6:1704054-1703715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr6:21231771-21231428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 113
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr6:54365068-54365434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1157-1500
               

               
Cow position:
               
chr6:19402103-19401753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 146
               

               
Conread position:
               
1158-1396
               

               
Cow position:
               
chr6:57320339-57320577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
1159-1389
               

               
Cow position:
               
chr6:50504711-50504470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
1159-1497
               

               
Cow position:
               
chr6:60118396-60118048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
1161-1332
               

               
Cow position:
               
chr6:54406552-54406727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
1161-1386
               

               
Cow position:
               
chr6:2078563-2078799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
1161-1389
               

               
Cow position:
               
chr6:67451409-67451632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr6:29210731-29210396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
178, 110
               

               
Conread position:
               
1162-1343
               

               
Cow position:
               
chr6:34423205-34423398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1162-1494
               

               
Cow position:
               
chr6:44194302-44194639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
1162-1500
               

               
Cow position:
               
chr6:2547516-2547143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 306
               

               
Conread position:
               
1162-1500
               

               
Cow position:
               
chr6:23532901-23532563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
1163-1330
               

               
Cow position:
               
chr6:8726929-8726751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1163-1331
               

               
Cow position:
               
chr6:4699955-4699780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1163-1363
               

               
Cow position:
               
chr6:41657517-41657307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1163-1389
               

               
Cow position:
               
chr6:21470180-21470415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr6:47575143-47574802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 83
               

               
Conread position:
               
1164-1319
               

               
Cow position:
               
chr6:47672901-47673062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
1164-1365
               

               
Cow position:
               
chr6:21083290-21083503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1164-1389
               

               
Cow position:
               
chr6:29775871-29775636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1164-1499
               

               
Cow position:
               
chr6:16700505-16700157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 263
               

               
Conread position:
               
1164-1500
               

               
Cow position:
               
chr6:24468146-24468496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 267
               

               
Conread position:
               
1164-1500
               

               
Cow position:
               
chr6:51581003-51581356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
1165-1354
               

               
Cow position:
               
chr6:36537112-36537311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1165-1411
               

               
Cow position:
               
chr6:60850949-60850689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1165-1422
               

               
Cow position:
               
chr6:1866981-1866713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
1166-1500
               

               
Cow position:
               
chr6:7128155-7128505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
1171-1389
               

               
Cow position:
               
chr6:1941590-1941818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 169
               

               
Conread position:
               
1171-1389
               

               
Cow position:
               
chr6:61110026-61109801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
1171-1389
               

               
Cow position:
               
chr6:67069571-67069801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
1171-1465
               

               
Cow position:
               
chr6:9302479-9302784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
1171-1500
               

               
Cow position:
               
chr6:5609198-5609543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 198
               

               
Conread position:
               
1173-1498
               

               
Cow position:
               
chr6:53460329-53460673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 270
               

               
Conread position:
               
1173-1500
               

               
Cow position:
               
chr6:38853414-38853757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 252
               

               
Conread position:
               
1173-1500
               

               
Cow position:
               
chr6:49398387-49398717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 197
               

               
Conread position:
               
1174-1499
               

               
Cow position:
               
chr6:24031604-24031277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
183, 89
               

               
Conread position:
               
1175-1474
               

               
Cow position:
               
chr6:22985622-22985935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 263
               

               
Conread position:
               
1175-1500
               

               
Cow position:
               
chr6:24004759-24004440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
182, 9
               

               
Conread position:
               
1175-1500
               

               
Cow position:
               
chr6:46466058-46465720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 261
               

               
Conread position:
               
1176-1381
               

               
Cow position:
               
chr6:12623748-12623537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 133
               

               
Conread position:
               
1177-1490
               

               
Cow position:
               
chr6:13687579-13687906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
1177-1497
               

               
Cow position:
               
chr6:38771509-38771186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
1178-1315
               

               
Cow position:
               
chr6:67614929-67615064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1178-1336
               

               
Cow position:
               
chr6:43540025-43540182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1178-1350
               

               
Cow position:
               
chr6:4323559-4323383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1360
               

               
Cow position:
               
chr6:69145580-69145403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
1178-1365
               

               
Cow position:
               
chr6:41226610-41226792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
176, 26
               

               
Conread position:
               
1178-1366
               

               
Cow position:
               
chr6:3937024-3936821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 169
               

               
Conread position:
               
1178-1372
               

               
Cow position:
               
chr6:23938288-23938091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1178-1375
               

               
Cow position:
               
chr6:51933776-51933582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
1178-1379
               

               
Cow position:
               
chr6:42035007-42034796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
1178-1380
               

               
Cow position:
               
chr6:26155382-26155171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
1178-1382
               

               
Cow position:
               
chr6:62056848-62056635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1178-1388
               

               
Cow position:
               
chr6:58725604-58725385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr6:66839430-66839212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 157
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr6:68685777-68685568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
1178-1392
               

               
Cow position:
               
chr6:43651961-43651762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
1178-1395
               

               
Cow position:
               
chr6:66570662-66570448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
1178-1420
               

               
Cow position:
               
chr6:48097366-48097627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
1178-1440
               

               
Cow position:
               
chr6:30024114-30023849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1178-1446
               

               
Cow position:
               
chr6:60143962-60144248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 268
               

               
Conread position:
               
1178-1465
               

               
Cow position:
               
chr6:17068418-17068717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
1178-1467
               

               
Cow position:
               
chr6:57545992-57546290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
1178-1473
               

               
Cow position:
               
chr6:693908-694223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 233
               

               
Conread position:
               
1178-1492
               

               
Cow position:
               
chr6:143141-143463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 179
               

               
Conread position:
               
1178-1495
               

               
Cow position:
               
chr6:45064798-45065112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
1178-1496
               

               
Cow position:
               
chr6:15300603-15300918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr6:53024574-53024896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 223
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr6:1429871-1429537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr6:32287868-32287536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr6:35726327-35725993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 240
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:120474-120140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:899084-899393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:9219500-9219170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 226
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:10105746-10106095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:10613067-10612757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 143
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:26728307-26728628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:28155936-28156251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:28477386-28477075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:32126289-32125966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:46859934-46860267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:50577752-50577421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:54490509-54490847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:59602978-59603310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 255
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr6:60273774-60274109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
1179-1489
               

               
Cow position:
               
chr6:52478175-52478506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 261
               

               
Conread position:
               
1179-1496
               

               
Cow position:
               
chr6:40032415-40032094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
180, 166
               

               
Conread position:
               
1179-1499
               

               
Cow position:
               
chr6:45690383-45690691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr6:18988427-18988110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
1180-1376
               

               
Cow position:
               
chr6:21293263-21293469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
1180-1376
               

               
Cow position:
               
chr6:41655820-41656015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
174, 69
               

               
Conread position:
               
1180-1382
               

               
Cow position:
               
chr6:53546264-53546056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1180-1388
               

               
Cow position:
               
chr6:3351263-3351043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1180-1389
               

               
Cow position:
               
chr6:19259123-19259328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
1180-1422
               

               
Cow position:
               
chr6:54082779-54083018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
1180-1479
               

               
Cow position:
               
chr6:67282117-67281812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 37
               

               
Conread position:
               
1180-1493
               

               
Cow position:
               
chr6:19293033-19292702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1180-1493
               

               
Cow position:
               
chr6:37463240-37462926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
1180-1496
               

               
Cow position:
               
chr6:31564117-31564437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
175, 43
               

               
Conread position:
               
1180-1496
               

               
Cow position:
               
chr6:37149417-37149088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr6:6965160-6965492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr6:37635004-37634684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr6:52901452-52901134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
159, 55
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr6:61269552-61269209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 264
               

               
Conread position:
               
1180-1498
               

               
Cow position:
               
chr6:19264266-19264597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
1180-1498
               

               
Cow position:
               
chr6:49421561-49421884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr6:15243074-15242734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr6:20196091-20196395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr6:47520289-47519948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:8966323-8965990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 254
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:11192245-11192569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:17090815-17090496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
179, 8
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:21456442-21456791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:23401760-23402092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:26450534-26450218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:31535338-31535670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 260
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:32122130-32121808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:32268652-32268979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:36196437-36196111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:36203056-36202725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 159
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:36470343-36470671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
179, 32
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr6:64432168-64431836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
1181-1348
               

               
Cow position:
               
chr6:32006222-32006399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1181-1498
               

               
Cow position:
               
chr6:29485317-29484989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 257
               

               
Conread position:
               
1181-1500
               

               
Cow position:
               
chr6:34195928-34196253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
1182-1330
               

               
Cow position:
               
chr6:7291544-7291389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr6:39358110-39358446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 306
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr6:65871264-65870925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
1184-1334
               

               
Cow position:
               
chr6:63182516-63182358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1186-1500
               

               
Cow position:
               
chr6:7119401-7119713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
171, 213
               

               
Conread position:
               
1187-1500
               

               
Cow position:
               
chr6:9008398-9008714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
1188-1328
               

               
Cow position:
               
chr6:23594162-23594020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1188-1500
               

               
Cow position:
               
chr6:15305798-15305478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
1188-1500
               

               
Cow position:
               
chr6:54133038-54132714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
1189-1386
               

               
Cow position:
               
chr6:34119137-34119337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
1189-1500
               

               
Cow position:
               
chr6:59719012-59718693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
1190-1494
               

               
Cow position:
               
chr6:63720417-63720098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1190-1500
               

               
Cow position:
               
chr6:28999732-29000028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
1191-1352
               

               
Cow position:
               
chr6:24905846-24905679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
1191-1446
               

               
Cow position:
               
chr6:37466301-37466053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
1191-1500
               

               
Cow position:
               
chr6:4383698-4383383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
1193-1500
               

               
Cow position:
               
chr6:60740232-60739912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 247
               

               
Conread position:
               
1196-1466
               

               
Cow position:
               
chr6:29248678-29248422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
1204-1500
               

               
Cow position:
               
chr6:58597307-58597607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
1205-1389
               

               
Cow position:
               
chr6:36920765-36920960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
1205-1466
               

               
Cow position:
               
chr6:67643479-67643760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 234
               

               
Conread position:
               
1210-1499
               

               
Cow position:
               
chr6:20097765-20098066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1213-1494
               

               
Cow position:
               
chr6:26915530-26915233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
1214-1500
               

               
Cow position:
               
chr6:8637478-8637172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 225
               

               
Conread position:
               
1233-1495
               

               
Cow position:
               
chr6:10176131-10176399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 191
               

               
Conread position:
               
1235-1396
               

               
Cow position:
               
chr6:67451202-67451364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1235-1499
               

               
Cow position:
               
chr6:21235212-21234942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1239-1500
               

               
Cow position:
               
chr6:53652205-53651940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
120, 131
               

               
Conread position:
               
1241-1485
               

               
Cow position:
               
chr6:6401113-6400863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
1241-1500
               

               
Cow position:
               
chr6:51463472-51463715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
1241-1500
               

               
Cow position:
               
chr6:57571642-57571374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1242-1389
               

               
Cow position:
               
chr6:58459882-58459735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
1242-1399
               

               
Cow position:
               
chr6:1002101-1002259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1242-1476
               

               
Cow position:
               
chr6:23465871-23466108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
1242-1497
               

               
Cow position:
               
chr6:61524043-61524301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
115, 186
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr6:15243417-15243153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
115, 205
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr6:38207330-38207594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr6:67951111-67950850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
138, 82
               

               
Conread position:
               
1243-1355
               

               
Cow position:
               
chr6:28900487-28900375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1244-1490
               

               
Cow position:
               
chr6:17794604-17794849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 183
               

               
Conread position:
               
1246-1354
               

               
Cow position:
               
chr6:60186505-60186613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1246-1420
               

               
Cow position:
               
chr6:12761436-12761271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
1246-1468
               

               
Cow position:
               
chr6:60516983-60516757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 75
               

               
Conread position:
               
1246-1490
               

               
Cow position:
               
chr6:50976208-50975965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
1246-1499
               

               
Cow position:
               
chr6:54990843-54991102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 186
               

               
Conread position:
               
1249-1389
               

               
Cow position:
               
chr6:53090163-53090023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
1249-1493
               

               
Cow position:
               
chr6:42565842-42565592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
1249-1494
               

               
Cow position:
               
chr6:9736505-9736741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
1249-1496
               

               
Cow position:
               
chr6:51675062-51674812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr6:9750902-9751148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr6:24781405-24781662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr6:46282849-46283103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 147
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr6:54867672-54867410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1251-1496
               

               
Cow position:
               
chr6:6343583-6343327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 145
               

               
Conread position:
               
1251-1499
               

               
Cow position:
               
chr6:9452616-9452871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 185
               

               
Conread position:
               
1251-1499
               

               
Cow position:
               
chr6:38218820-38218570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
1252-1486
               

               
Cow position:
               
chr6:37332262-37332018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1252-1488
               

               
Cow position:
               
chr6:17245466-17245697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
1252-1493
               

               
Cow position:
               
chr6:66375182-66375426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
1252-1497
               

               
Cow position:
               
chr6:6067549-6067791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
1252-1497
               

               
Cow position:
               
chr6:38641644-38641394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
1252-1498
               

               
Cow position:
               
chr6:58590425-58590177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 178
               

               
Conread position:
               
1252-1499
               

               
Cow position:
               
chr6:46571257-46571015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
107, 118
               

               
Conread position:
               
1252-1499
               

               
Cow position:
               
chr6:47799445-47799189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1252-1499
               

               
Cow position:
               
chr6:67214901-67214642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:13040591-13040354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:21869497-21869751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 194
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:28976888-28977138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 178
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:47339204-47339455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 186
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:48112348-48112096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:55282141-55282389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:61168907-61168672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
105, 134
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr6:66874499-66874248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
1254-1495
               

               
Cow position:
               
chr6:16423852-16423602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
1254-1500
               

               
Cow position:
               
chr6:5113903-5114148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 83
               

               
Conread position:
               
1254-1500
               

               
Cow position:
               
chr6:8787887-8788141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1257-1395
               

               
Cow position:
               
chr6:57328247-57328386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
1258-1381
               

               
Cow position:
               
chr6:63065975-63065848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1258-1452
               

               
Cow position:
               
chr6:31078723-31078927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr6:7130734-7130983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr6:8209460-8209694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr6:60350146-60350398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
101, 180
               

               
Conread position:
               
1263-1389
               

               
Cow position:
               
chr6:1871057-1871184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1263-1420
               

               
Cow position:
               
chr6:60266042-60266207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1263-1498
               

               
Cow position:
               
chr6:47640291-47640534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:1499781-1499537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:4864406-4864651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
92, 168
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:12551410-12551167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:14958199-14958448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 175
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:21111092-21110862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 131
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:35613276-35613517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 170
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:59069479-59069727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr6:66531681-66531924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
1264-1392
               

               
Cow position:
               
chr6:32853327-32853199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
1265-1500
               

               
Cow position:
               
chr6:56843293-56843053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
1277-1490
               

               
Cow position:
               
chr6:23247839-23248052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
1277-1500
               

               
Cow position:
               
chr6:61608639-61608408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
1278-1474
               

               
Cow position:
               
chr6:15022421-15022625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 160
               

               
Conread position:
               
1279-1493
               

               
Cow position:
               
chr6:28318522-28318308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
1284-1500
               

               
Cow position:
               
chr6:130043-130264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
1299-1499
               

               
Cow position:
               
chr6:52248025-52248233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
1331-1499
               

               
Cow position:
               
chr6:18961442-18961618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1341-1499
               

               
Cow position:
               
chr6:6460605-6460441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 93
               
Show alignments to all cow chromosomes.