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Cow genome map

           
Conread name:
           
Ss1.1-Utr1-UTR010020F01.5.5
        

               
Conread position:
               
1102-1382
               

               
Cow position:
               
chr7:11796583-11796879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
1135-1497
               

               
Cow position:
               
chr7:41293464-41293846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
1145-1410
               

               
Cow position:
               
chr7:6043861-6044142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
1151-1500
               

               
Cow position:
               
chr7:53053137-53053502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 292
               

               
Conread position:
               
1152-1500
               

               
Cow position:
               
chr7:25415664-25415298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
1154-1500
               

               
Cow position:
               
chr7:15548292-15547957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
1155-1352
               

               
Cow position:
               
chr7:25087505-25087301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1155-1462
               

               
Cow position:
               
chr7:10599429-10599740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
1156-1346
               

               
Cow position:
               
chr7:63101666-63101477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
1156-1480
               

               
Cow position:
               
chr7:60870187-60869867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
203, 104
               

               
Conread position:
               
1156-1490
               

               
Cow position:
               
chr7:4719965-4720322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
1156-1496
               

               
Cow position:
               
chr7:51644903-51644564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
1156-1498
               

               
Cow position:
               
chr7:25263632-25263272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr7:14519781-14520144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 245
               

               
Conread position:
               
1156-1500
               

               
Cow position:
               
chr7:40567316-40566971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 7
               

               
Conread position:
               
1158-1382
               

               
Cow position:
               
chr7:26263395-26263630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
1158-1483
               

               
Cow position:
               
chr7:32259941-32260285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
1158-1500
               

               
Cow position:
               
chr7:48667669-48667325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 190
               

               
Conread position:
               
1159-1500
               

               
Cow position:
               
chr7:22793593-22793248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 263
               

               
Conread position:
               
1161-1355
               

               
Cow position:
               
chr7:17752550-17752748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
1161-1389
               

               
Cow position:
               
chr7:18464238-18464468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
1161-1500
               

               
Cow position:
               
chr7:14524726-14524379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
1162-1500
               

               
Cow position:
               
chr7:32946320-32945973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
1163-1338
               

               
Cow position:
               
chr7:11511973-11511792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1163-1389
               

               
Cow position:
               
chr7:61699453-61699678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
1163-1401
               

               
Cow position:
               
chr7:63121161-63121408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
1163-1464
               

               
Cow position:
               
chr7:35088914-35088594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1163-1480
               

               
Cow position:
               
chr7:11714188-11714507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 86
               

               
Conread position:
               
1163-1491
               

               
Cow position:
               
chr7:20219588-20219927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
1163-1496
               

               
Cow position:
               
chr7:44049142-44049467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
196, 76
               

               
Conread position:
               
1163-1499
               

               
Cow position:
               
chr7:36665582-36665232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
1163-1500
               

               
Cow position:
               
chr7:50860250-50859912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
187, 131
               

               
Conread position:
               
1164-1338
               

               
Cow position:
               
chr7:5914483-5914299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1164-1500
               

               
Cow position:
               
chr7:1376379-1376040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
1164-1500
               

               
Cow position:
               
chr7:63749228-63749575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
1164-1500
               

               
Cow position:
               
chr7:63946345-63946683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
1165-1367
               

               
Cow position:
               
chr7:11784793-11785006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1165-1376
               

               
Cow position:
               
chr7:29505364-29505144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1165-1398
               

               
Cow position:
               
chr7:36284949-36284699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
1165-1497
               

               
Cow position:
               
chr7:10448562-10448878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
1165-1497
               

               
Cow position:
               
chr7:26631582-26631912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 72
               

               
Conread position:
               
1165-1500
               

               
Cow position:
               
chr7:14174191-14174515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
1166-1500
               

               
Cow position:
               
chr7:24220902-24220569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
1167-1499
               

               
Cow position:
               
chr7:62193808-62193467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
1167-1500
               

               
Cow position:
               
chr7:50065867-50066213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
75, 269
               

               
Conread position:
               
1171-1377
               

               
Cow position:
               
chr7:62497807-62498021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
1171-1497
               

               
Cow position:
               
chr7:30276984-30276639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1171-1500
               

               
Cow position:
               
chr7:31497947-31497621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
1172-1500
               

               
Cow position:
               
chr7:33698199-33697855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
1173-1388
               

               
Cow position:
               
chr7:10414896-10415117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
1173-1498
               

               
Cow position:
               
chr7:29300533-29300855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
1173-1499
               

               
Cow position:
               
chr7:29510178-29509854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 220
               

               
Conread position:
               
1173-1500
               

               
Cow position:
               
chr7:29479765-29479425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
1173-1500
               

               
Cow position:
               
chr7:47513442-47513788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
1174-1383
               

               
Cow position:
               
chr7:50021223-50021436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
1174-1472
               

               
Cow position:
               
chr7:26909520-26909824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 174
               

               
Conread position:
               
1174-1497
               

               
Cow position:
               
chr7:33386159-33385829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
1175-1401
               

               
Cow position:
               
chr7:60161285-60161064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
1176-1500
               

               
Cow position:
               
chr7:49751371-49751026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 145
               

               
Conread position:
               
1177-1488
               

               
Cow position:
               
chr7:14541843-14542147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
1178-1316
               

               
Cow position:
               
chr7:49222214-49222352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
1178-1337
               

               
Cow position:
               
chr7:32436577-32436732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1178-1345
               

               
Cow position:
               
chr7:19329070-19329247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1178-1347
               

               
Cow position:
               
chr7:38357410-38357581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1348
               

               
Cow position:
               
chr7:51621630-51621454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr7:23671992-23671803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1355
               

               
Cow position:
               
chr7:30277556-30277384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1178-1376
               

               
Cow position:
               
chr7:39823379-39823569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
1178-1378
               

               
Cow position:
               
chr7:39947008-39947222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1178-1381
               

               
Cow position:
               
chr7:12488663-12488457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1178-1382
               

               
Cow position:
               
chr7:4138522-4138733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr7:8089401-8089182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 154
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr7:11487437-11487656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr7:23762206-23761991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr7:38136043-38135829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
1178-1389
               

               
Cow position:
               
chr7:56556914-56557131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 146
               

               
Conread position:
               
1178-1397
               

               
Cow position:
               
chr7:9077569-9077802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1178-1414
               

               
Cow position:
               
chr7:31523785-31523534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1178-1422
               

               
Cow position:
               
chr7:17750602-17750862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1438
               

               
Cow position:
               
chr7:12494882-12495148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
72, 219
               

               
Conread position:
               
1178-1454
               

               
Cow position:
               
chr7:11897701-11897414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1178-1465
               

               
Cow position:
               
chr7:6058345-6058059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
176, 64
               

               
Conread position:
               
1178-1487
               

               
Cow position:
               
chr7:29027361-29027068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
1178-1489
               

               
Cow position:
               
chr7:15533844-15534162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
1178-1490
               

               
Cow position:
               
chr7:37362091-37361790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
181, 59
               

               
Conread position:
               
1178-1494
               

               
Cow position:
               
chr7:36996597-36996280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
1178-1496
               

               
Cow position:
               
chr7:27079865-27079530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 259
               

               
Conread position:
               
1178-1497
               

               
Cow position:
               
chr7:31170720-31171049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
1178-1497
               

               
Cow position:
               
chr7:31315540-31315215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
1178-1497
               

               
Cow position:
               
chr7:46856729-46857057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr7:18247598-18247904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
1178-1498
               

               
Cow position:
               
chr7:33393547-33393216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr7:20168785-20168452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr7:54712655-54712319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1178-1499
               

               
Cow position:
               
chr7:64003682-64003369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:4452843-4452503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:4765078-4764747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 197
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:5026936-5027254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:5199319-5199651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:11066710-11066374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:15559923-15559591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 248
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:15570276-15569941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 254
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:18508306-18508631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:18544151-18544476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:23205389-23205732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:23251345-23251663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:27509939-27509618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:30931744-30932076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:32240832-32240532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:34554485-34554164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:35274847-35275181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:39416145-39415808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 256
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:40263433-40263748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 71
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:40406882-40406558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:52295356-52295031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 83
               

               
Conread position:
               
1178-1500
               

               
Cow position:
               
chr7:58170963-58170640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
1179-1393
               

               
Cow position:
               
chr7:6469864-6469633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1179-1481
               

               
Cow position:
               
chr7:35300183-35300501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
1179-1495
               

               
Cow position:
               
chr7:37394537-37394221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 175
               

               
Conread position:
               
1179-1497
               

               
Cow position:
               
chr7:19466020-19466351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 250
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr7:17782454-17782779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr7:47547643-47547305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr7:59076069-59075745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
1179-1500
               

               
Cow position:
               
chr7:67839562-67839240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 66
               

               
Conread position:
               
1180-1328
               

               
Cow position:
               
chr7:28428507-28428357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1180-1351
               

               
Cow position:
               
chr7:24022236-24022408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
1180-1354
               

               
Cow position:
               
chr7:23819129-23818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
1180-1355
               

               
Cow position:
               
chr7:12918345-12918526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 150
               

               
Conread position:
               
1180-1381
               

               
Cow position:
               
chr7:29009865-29010051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
177, 21
               

               
Conread position:
               
1180-1389
               

               
Cow position:
               
chr7:32884391-32884182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
1180-1409
               

               
Cow position:
               
chr7:53653532-53653768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1180-1431
               

               
Cow position:
               
chr7:11176498-11176750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
1180-1446
               

               
Cow position:
               
chr7:38429480-38429758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 182
               

               
Conread position:
               
1180-1473
               

               
Cow position:
               
chr7:20918126-20918428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
1180-1484
               

               
Cow position:
               
chr7:8658751-8658429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1180-1490
               

               
Cow position:
               
chr7:34214810-34214504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
1180-1492
               

               
Cow position:
               
chr7:9449432-9449742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
1180-1496
               

               
Cow position:
               
chr7:4893086-4892769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
1180-1496
               

               
Cow position:
               
chr7:20535109-20534780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 257
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr7:20968661-20968337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
1180-1497
               

               
Cow position:
               
chr7:42593027-42593378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 281
               

               
Conread position:
               
1180-1499
               

               
Cow position:
               
chr7:13133491-13133790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
271, 30
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:10384-10044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 258
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:20627-20305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:11960628-11960316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:14536051-14536384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:20537592-20537262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:23679355-23679692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:43711449-43711118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:48020662-48020320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 265
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:48721668-48722003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:49417843-49417503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 264
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:53785752-53786059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
130, 208
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:56838286-56838595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:57537301-57537621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
1180-1500
               

               
Cow position:
               
chr7:69066916-69066597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
1181-1334
               

               
Cow position:
               
chr7:15951658-15951819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1181-1450
               

               
Cow position:
               
chr7:18947523-18947796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
201, 81
               

               
Conread position:
               
1181-1499
               

               
Cow position:
               
chr7:56820352-56820671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 198
               

               
Conread position:
               
1181-1500
               

               
Cow position:
               
chr7:46818264-46818595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
1181-1500
               

               
Cow position:
               
chr7:49105967-49106302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 168
               

               
Conread position:
               
1181-1500
               

               
Cow position:
               
chr7:58301703-58302040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
8, 245
               

               
Conread position:
               
1182-1355
               

               
Cow position:
               
chr7:8316227-8316394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
1182-1406
               

               
Cow position:
               
chr7:9660504-9660275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
1182-1477
               

               
Cow position:
               
chr7:24168724-24168433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
199, 67
               

               
Conread position:
               
1182-1499
               

               
Cow position:
               
chr7:4129552-4129881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 255
               

               
Conread position:
               
1182-1500
               

               
Cow position:
               
chr7:43908430-43908106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 82
               

               
Conread position:
               
1184-1466
               

               
Cow position:
               
chr7:428554-428849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
1184-1497
               

               
Cow position:
               
chr7:64949337-64949015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
1186-1493
               

               
Cow position:
               
chr7:53382412-53382107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
189, 59
               

               
Conread position:
               
1188-1389
               

               
Cow position:
               
chr7:14317168-14316959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 196
               

               
Conread position:
               
1188-1500
               

               
Cow position:
               
chr7:3336332-3336652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 104
               

               
Conread position:
               
1193-1497
               

               
Cow position:
               
chr7:59168475-59168174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
1205-1354
               

               
Cow position:
               
chr7:53782607-53782766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1210-1500
               

               
Cow position:
               
chr7:39904297-39903992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
1211-1389
               

               
Cow position:
               
chr7:14486269-14486092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
1213-1499
               

               
Cow position:
               
chr7:34412091-34412374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
1216-1500
               

               
Cow position:
               
chr7:42637167-42636880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 170
               

               
Conread position:
               
1219-1500
               

               
Cow position:
               
chr7:18188038-18188322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
1223-1495
               

               
Cow position:
               
chr7:47698189-47697920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
1223-1496
               

               
Cow position:
               
chr7:32915299-32915013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 213
               

               
Conread position:
               
1223-1500
               

               
Cow position:
               
chr7:51319991-51319699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
1229-1500
               

               
Cow position:
               
chr7:21565380-21565655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
1229-1500
               

               
Cow position:
               
chr7:28544357-28544075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
1241-1489
               

               
Cow position:
               
chr7:33990117-33989867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
1241-1497
               

               
Cow position:
               
chr7:61823685-61823952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
78, 189
               

               
Conread position:
               
1242-1366
               

               
Cow position:
               
chr7:13096143-13096018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1242-1378
               

               
Cow position:
               
chr7:32222228-32222090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
1242-1465
               

               
Cow position:
               
chr7:24461115-24460893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 152
               

               
Conread position:
               
1242-1496
               

               
Cow position:
               
chr7:34974473-34974218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
95, 147
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:17713307-17713573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 185
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:17816913-17816653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 198
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:23089983-23090229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:23936275-23936013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
115, 127
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:26737182-26737436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 177
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:34422108-34422369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:44596538-44596800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:57258859-57259128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 254
               

               
Conread position:
               
1242-1500
               

               
Cow position:
               
chr7:64364364-64364627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 188
               

               
Conread position:
               
1243-1389
               

               
Cow position:
               
chr7:8090255-8090400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1243-1500
               

               
Cow position:
               
chr7:39325889-39325640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
116, 82
               

               
Conread position:
               
1246-1499
               

               
Cow position:
               
chr7:41315276-41315534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
1246-1500
               

               
Cow position:
               
chr7:23568575-23568837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
1247-1497
               

               
Cow position:
               
chr7:13593927-13593668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
1249-1382
               

               
Cow position:
               
chr7:598399-598267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 8
               

               
Conread position:
               
1249-1392
               

               
Cow position:
               
chr7:31240840-31240697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
1249-1475
               

               
Cow position:
               
chr7:33298288-33298519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
1249-1475
               

               
Cow position:
               
chr7:60732481-60732715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 76
               

               
Conread position:
               
1249-1483
               

               
Cow position:
               
chr7:10381957-10381718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
1249-1490
               

               
Cow position:
               
chr7:25511967-25512214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
104, 181
               

               
Conread position:
               
1249-1499
               

               
Cow position:
               
chr7:29279864-29280112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr7:3256188-3256454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr7:28917248-28916986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 180
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr7:58363089-58362850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1249-1500
               

               
Cow position:
               
chr7:61790195-61790457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1250-1500
               

               
Cow position:
               
chr7:5853504-5853258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
1251-1392
               

               
Cow position:
               
chr7:29863904-29863763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
1251-1461
               

               
Cow position:
               
chr7:29122056-29121840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
1251-1497
               

               
Cow position:
               
chr7:147571-147314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
1251-1498
               

               
Cow position:
               
chr7:10943405-10943648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
129, 109
               

               
Conread position:
               
1251-1499
               

               
Cow position:
               
chr7:14765973-14766236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr7:8977669-8977919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 89
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr7:10512558-10512810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr7:14632520-14632278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr7:23636858-23636607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
1251-1500
               

               
Cow position:
               
chr7:65122487-65122242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
1252-1381
               

               
Cow position:
               
chr7:52517480-52517350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1252-1382
               

               
Cow position:
               
chr7:43307329-43307198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1252-1474
               

               
Cow position:
               
chr7:18288116-18288342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
1252-1487
               

               
Cow position:
               
chr7:21008780-21009026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
1252-1494
               

               
Cow position:
               
chr7:31094194-31094443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
1252-1496
               

               
Cow position:
               
chr7:6042126-6041880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
1252-1497
               

               
Cow position:
               
chr7:36278451-36278198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
1252-1497
               

               
Cow position:
               
chr7:44454126-44454378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 176
               

               
Conread position:
               
1252-1498
               

               
Cow position:
               
chr7:55688041-55688296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:23646765-23646506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
104, 187
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:27283828-27283582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
105, 84
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:38082311-38082055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:40067814-40067558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:41327880-41328141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 189
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:48715008-48714751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
105, 175
               

               
Conread position:
               
1252-1500
               

               
Cow position:
               
chr7:49903926-49903675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
1253-1458
               

               
Cow position:
               
chr7:33720187-33719975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
1253-1498
               

               
Cow position:
               
chr7:42244552-42244792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr7:2579084-2579343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr7:10122845-10122609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr7:15755293-15755550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1253-1500
               

               
Cow position:
               
chr7:49648510-49648264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
1254-1498
               

               
Cow position:
               
chr7:9926578-9926829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1254-1500
               

               
Cow position:
               
chr7:39450997-39451234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
1255-1489
               

               
Cow position:
               
chr7:63707166-63707394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
1258-1396
               

               
Cow position:
               
chr7:43297058-43296919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1258-1423
               

               
Cow position:
               
chr7:49405435-49405264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1258-1475
               

               
Cow position:
               
chr7:23456673-23456899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 170
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr7:40121619-40121364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr7:40952717-40952962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr7:45331686-45331448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr7:53806675-53806919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
1258-1500
               

               
Cow position:
               
chr7:66748391-66748625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
1260-1389
               

               
Cow position:
               
chr7:35245444-35245571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
1261-1378
               

               
Cow position:
               
chr7:40276048-40276165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
1262-1397
               

               
Cow position:
               
chr7:37498049-37498186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1262-1500
               

               
Cow position:
               
chr7:48243816-48243573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 168
               

               
Conread position:
               
1263-1448
               

               
Cow position:
               
chr7:56886368-56886558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
1263-1490
               

               
Cow position:
               
chr7:13228436-13228667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 150
               

               
Conread position:
               
1263-1500
               

               
Cow position:
               
chr7:30816149-30816387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
1264-1488
               

               
Cow position:
               
chr7:39472374-39472606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
1264-1498
               

               
Cow position:
               
chr7:5237941-5238168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 132
               

               
Conread position:
               
1264-1500
               

               
Cow position:
               
chr7:52382837-52383076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
1265-1500
               

               
Cow position:
               
chr7:45927023-45927258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
1266-1500
               

               
Cow position:
               
chr7:31881800-31881576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
1267-1500
               

               
Cow position:
               
chr7:8272801-8272559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 170
               

               
Conread position:
               
1272-1500
               

               
Cow position:
               
chr7:21650233-21650002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 159
               

               
Conread position:
               
1273-1500
               

               
Cow position:
               
chr7:25496857-25496633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
1273-1500
               

               
Cow position:
               
chr7:62733313-62733083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 149
               

               
Conread position:
               
1275-1500
               

               
Cow position:
               
chr7:38263804-38263569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
1276-1392
               

               
Cow position:
               
chr7:57243895-57244012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1276-1483
               

               
Cow position:
               
chr7:8102551-8102338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
1277-1499
               

               
Cow position:
               
chr7:19267241-19267469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
1286-1499
               

               
Cow position:
               
chr7:17757153-17756938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
1291-1500
               

               
Cow position:
               
chr7:3773151-3773367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
1312-1500
               

               
Cow position:
               
chr7:14353694-14353890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 124
               

               
Conread position:
               
1334-1500
               

               
Cow position:
               
chr7:32819891-32819715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.