Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR010021G03.5
        

               Conread position:
               3-292
               

               Cow position:
               chr29:36968828-36969117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-390
               

               Cow position:
               chr29:36969317-36969424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               390-478
               

               Cow position:
               chr29:36969715-36969803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               534-611
               

               Cow position:
               chr29:36970081-36970158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               78
               

               Alignm identity:
               72
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               613-736
               

               Cow position:
               chr29:36971199-36971321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               724-874
               

               Cow position:
               chr29:36971429-36971579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               130
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               871-970
               

               Cow position:
               chr29:36971663-36971762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1051-1201
               

               Cow position:
               chr29:36972736-36972886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               148, 136
               

               Conread position:
               1234-1329
               

               Cow position:
               chr29:36973269-36973364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1385-1909
               

               Cow position:
               chr29:36973862-36974375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 85
               
Show alignments to all cow chromosomes.