Cow genome map
Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
Conread position: | 117-461 |
Cow position: | chr1:18240951-18240587 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 235 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 39, 180 |
Conread position: | 119-430 |
Cow position: | chr1:77613706-77614019 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 224 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 11, 115 |
Conread position: | 120-435 |
Cow position: | chr1:38419939-38420266 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 224 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 35, 210 |
Conread position: | 120-470 |
Cow position: | chr1:56724417-56724792 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 249 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 120-472 |
Cow position: | chr1:72082043-72082406 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 247 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 63, 182 |
Conread position: | 120-483 |
Cow position: | chr1:28874344-28874729 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 258 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 121-503 |
Cow position: | chr1:81841200-81840810 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 276 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 34, 158 |
Conread position: | 122-483 |
Cow position: | chr1:54407313-54406945 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 245 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 34, 193 |
Conread position: | 123-483 |
Cow position: | chr1:29412887-29412537 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 238 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 36, 244 |
Conread position: | 125-442 |
Cow position: | chr1:31121605-31121274 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 224 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 31, 175 |
Conread position: | 137-482 |
Cow position: | chr1:82071021-82071379 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 229 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 19, 199 |
Conread position: | 161-483 |
Cow position: | chr1:61541627-61541952 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 213 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 22, 80 |
Conread position: | 164-480 |
Cow position: | chr1:74285344-74285020 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 220 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 30, 165 |
Conread position: | 164-483 |
Cow position: | chr1:49972828-49972511 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 220 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 27, 63 |
Conread position: | 164-483 |
Cow position: | chr1:76750638-76750310 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 218 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 6, 34 |
Conread position: | 172-483 |
Cow position: | chr1:40511674-40511359 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 208 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 19, 51 |
Conread position: | 173-477 |
Cow position: | chr1:82565459-82565769 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 181 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 176-468 |
Cow position: | chr1:21998054-21997771 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 201 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 29, 40 |
Conread position: | 191-477 |
Cow position: | chr1:59207712-59207423 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 196 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 48, 10 |
Conread position: | 191-480 |
Cow position: | chr1:73069699-73069399 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-480 |
Cow position: | chr1:90607515-90607219 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 196 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-483 |
Cow position: | chr1:25551328-25551626 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 206 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-483 |
Cow position: | chr1:55777952-55778249 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 199 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 27, 75 |
Conread position: | 191-483 |
Cow position: | chr1:62243290-62242991 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 204 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-483 |
Cow position: | chr1:79455590-79455291 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 200 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-483 |
Cow position: | chr1:82922791-82922501 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 203 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 27, 94 |
Conread position: | 191-483 |
Cow position: | chr1:88132139-88132438 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 206 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 27, 182 |
Conread position: | 196-483 |
Cow position: | chr1:56192794-56192502 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 194 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 22, 129 |
Conread position: | 196-483 |
Cow position: | chr1:71740771-71740482 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 201 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 12, 20 |
Conread position: | 197-501 |
Cow position: | chr1:32566554-32566243 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 21, 212 |
Conread position: | 198-483 |
Cow position: | chr1:89769165-89768879 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 193 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 7, 26 |
Conread position: | 203-448 |
Cow position: | chr1:5356506-5356753 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 172 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:4209586-4209864 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 194 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:10723960-10724235 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 183 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:20525857-20526135 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 188 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:20830273-20830551 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 188 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:50210464-50210186 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 195 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:53199923-53200200 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 188 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 36, 20 |
Conread position: | 203-477 |
Cow position: | chr1:69767958-69768236 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 186 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:80357796-80357514 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 189 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr1:82477354-82477632 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 183 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 203-480 |
Cow position: | chr1:17940392-17940111 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 191 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 31, 14 |
Conread position: | 203-480 |
Cow position: | chr1:57423454-57423174 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 194 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-483 |
Cow position: | chr1:40575578-40575862 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 193 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-483 |
Cow position: | chr1:82654039-82654319 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 186 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-504 |
Cow position: | chr1:81288513-81288826 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 211 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-504 |
Cow position: | chr1:85793059-85793372 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 210 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 204-484 |
Cow position: | chr1:33713450-33713734 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 188 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 208-483 |
Cow position: | chr1:46837010-46837286 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 183 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 40, 108 |
Conread position: | 208-506 |
Cow position: | chr1:85531972-85531665 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 206 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 38, 29 |
Conread position: | 211-480 |
Cow position: | chr1:57658279-57658553 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 186 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 27, 154 |
Conread position: | 217-465 |
Cow position: | chr1:31364708-31364460 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 170 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 21, 125 |
Conread position: | 217-465 |
Cow position: | chr1:57364953-57364705 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 13, 59 |
Conread position: | 217-465 |
Cow position: | chr1:72185490-72185237 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 180 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 217-477 |
Cow position: | chr1:39545177-39545443 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 175 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-477 |
Cow position: | chr1:40056494-40056760 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 182 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-477 |
Cow position: | chr1:71561355-71561089 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 178 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-477 |
Cow position: | chr1:77923098-77923364 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 181 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-477 |
Cow position: | chr1:80445541-80445807 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-477 |
Cow position: | chr1:86546746-86546481 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 177 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 217-479 |
Cow position: | chr1:99219138-99218881 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 174 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 238, 104 |
Conread position: | 217-483 |
Cow position: | chr1:5503358-5503626 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 185 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 13, 81 |
Conread position: | 217-483 |
Cow position: | chr1:26517499-26517227 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 190 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 220-483 |
Cow position: | chr1:30533626-30533362 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 184 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 33, 104 |
Conread position: | 220-483 |
Cow position: | chr1:91891725-91891459 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 27, 188 |
Conread position: | 224-477 |
Cow position: | chr1:102433643-102433384 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 187 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 6, 101 |
Conread position: | 224-483 |
Cow position: | chr1:33552326-33552591 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 187 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 224-483 |
Cow position: | chr1:52357856-52357597 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 182 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 151, 13 |
Conread position: | 224-483 |
Cow position: | chr1:56142947-56142682 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 182 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 6, 153 |
Conread position: | 225-480 |
Cow position: | chr1:12060808-12060549 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 183 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 5, 184 |
Conread position: | 225-480 |
Cow position: | chr1:93855913-93856171 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 179 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 21, 183 |
Conread position: | 229-465 |
Cow position: | chr1:30074274-30074511 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 166 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 24, 147 |
Conread position: | 229-465 |
Cow position: | chr1:69404407-69404643 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 168 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 24, 95 |
Conread position: | 229-477 |
Cow position: | chr1:85779047-85778799 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 170 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 24, 129 |
Conread position: | 229-483 |
Cow position: | chr1:91597315-91597050 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 179 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 229-483 |
Cow position: | chr1:94661075-94661331 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 173 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 24, 147 |
Conread position: | 230-465 |
Cow position: | chr1:31417104-31416865 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 161 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 16, 169 |
Conread position: | 238-480 |
Cow position: | chr1:76095647-76095408 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 167 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 60, 43 |
Conread position: | 238-504 |
Cow position: | chr1:55275618-55275340 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 240-483 |
Cow position: | chr1:34507841-34508077 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 57, 134 |
Conread position: | 242-477 |
Cow position: | chr1:17011317-17011082 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 159 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 57, 157 |
Conread position: | 242-477 |
Cow position: | chr1:33852687-33852925 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 161 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 242-483 |
Cow position: | chr1:48248334-48248565 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 170 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 59, 39 |
Conread position: | 242-504 |
Cow position: | chr1:77463077-77463336 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 179 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 65, 38 |
Conread position: | 252-461 |
Cow position: | chr1:2180763-2180969 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 41, 25 |
Conread position: | 356-504 |
Cow position: | chr1:66279434-66279586 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.