Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 117-455 |
| Cow position: | chr12:19222231-19222564 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 120-471 |
| Cow position: | chr12:20843832-20844190 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 120-475 |
| Cow position: | chr12:11510732-11511087 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 121-479 |
| Cow position: | chr12:41465280-41464914 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 124-508 |
| Cow position: | chr12:35345768-35346174 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 224 |
| Conread position: | 127-477 |
| Cow position: | chr12:24994705-24994358 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 169-477 |
| Cow position: | chr12:21943029-21943348 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 196-477 |
| Cow position: | chr12:27854646-27854360 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 197-477 |
| Cow position: | chr12:34174438-34174722 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 201-477 |
| Cow position: | chr12:21209988-21210269 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 201-477 |
| Cow position: | chr12:21429333-21429613 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 203-504 |
| Cow position: | chr12:3362268-3362574 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 204-483 |
| Cow position: | chr12:22204385-22204101 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 217-483 |
| Cow position: | chr12:14661011-14660739 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 265 |
| Conread position: | 220-483 |
| Cow position: | chr12:1403845-1404106 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 131 |
| Conread position: | 225-483 |
| Cow position: | chr12:27931562-27931298 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 225-501 |
| Cow position: | chr12:11099574-11099854 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 263 |
| Conread position: | 237-480 |
| Cow position: | chr12:32654918-32655158 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 250-512 |
| Cow position: | chr12:30677011-30677287 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 83 |
| Conread position: | 251-483 |
| Cow position: | chr12:1888183-1887948 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 263-477 |
| Cow position: | chr12:22568367-22568150 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 145 |
| Conread position: | 267-477 |
| Cow position: | chr12:42606856-42606646 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 74 |
Show alignments to all cow chromosomes.