Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 114-478 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 120-483 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 120-504 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 122-476 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 123-468 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 285 |
| Conread position: | 123-476 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 33, 297 |
| Conread position: | 163-480 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 164-470 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 164-473 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 164-480 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 162 |
| Conread position: | 164-483 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 167-483 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 176-483 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 181-453 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 219 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 217 |
| Conread position: | 197-445 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 197-501 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 203-476 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-483 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 215-477 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 217-465 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 217-472 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 217-477 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 219-483 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 219-483 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 220-480 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 221-480 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 221-503 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 223-477 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 224-477 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 224-477 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 224-483 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 133 |
| Conread position: | 224-483 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 224-504 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 15, 185 |
| Conread position: | 224-504 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 225-483 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 226-483 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 229-483 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 166, 91 |
| Conread position: | 238-477 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 240-491 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 241-501 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 167 |
| Conread position: | 242-473 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 155 |
| Conread position: | 242-477 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 242-477 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 242-477 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 242-477 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 242-483 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 242-483 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 242-503 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 243-477 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 251-465 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 251-483 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 175 |
| Conread position: | 256-483 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 262-483 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 262-504 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 269-483 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 298-477 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.