Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 116-470 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 292 |
| Conread position: | 121-482 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 290 |
| Conread position: | 121-483 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 220 |
| Conread position: | 121-501 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 122-360 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 122-481 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 127-459 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 136-482 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 164 |
| Conread position: | 164-457 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 164-465 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 164-474 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 165-503 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 26 |
| Conread position: | 167-480 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 167-483 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 211 |
| Conread position: | 176-483 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 180-483 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 191-463 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-476 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 199-483 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 201-495 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 203-465 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-465 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 204-483 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 206-480 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 206-482 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 208-475 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 217-470 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 255 |
| Conread position: | 217-477 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 189 |
| Conread position: | 217-477 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 224 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 218-474 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 219-477 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 219-480 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 220-483 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 225-453 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 100 |
| Conread position: | 225-477 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 99 |
| Conread position: | 225-483 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 225-501 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 237-483 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 321-465 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 321-477 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 322-482 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 324-504 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 113 |
Show alignments to all cow chromosomes.