Cow genome map
Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
Conread position: | 116-470 |
Cow position: | chr16:39824468-39824831 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 232 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 101, 292 |
Conread position: | 121-482 |
Cow position: | chr16:707726-707345 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 248 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 43, 290 |
Conread position: | 121-483 |
Cow position: | chr16:13410466-13410856 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 254 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 220 |
Conread position: | 121-501 |
Cow position: | chr16:27299597-27299210 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 259 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 22, 56 |
Conread position: | 122-360 |
Cow position: | chr16:38540387-38540146 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 168 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 33, 11 |
Conread position: | 122-481 |
Cow position: | chr16:42060408-42060055 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 234 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 46 |
Conread position: | 127-459 |
Cow position: | chr16:41166117-41165773 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 238 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 28, 63 |
Conread position: | 136-482 |
Cow position: | chr16:49472188-49472560 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 262 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 20, 164 |
Conread position: | 164-457 |
Cow position: | chr16:25342567-25342867 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 164-465 |
Cow position: | chr16:40557358-40557042 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 164-474 |
Cow position: | chr16:28436873-28436549 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 211 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 42, 10 |
Conread position: | 165-503 |
Cow position: | chr16:52888451-52888789 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 232 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 132, 26 |
Conread position: | 167-480 |
Cow position: | chr16:14665214-14664895 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 208 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 16, 122 |
Conread position: | 167-483 |
Cow position: | chr16:5485327-5485645 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 208 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 13, 211 |
Conread position: | 176-483 |
Cow position: | chr16:5890618-5890922 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 204 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 124, 32 |
Conread position: | 180-483 |
Cow position: | chr16:2482521-2482214 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 209 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 23, 40 |
Conread position: | 191-463 |
Cow position: | chr16:406414-406136 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 194 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-476 |
Cow position: | chr16:3330562-3330844 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 191 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 135 |
Conread position: | 191-483 |
Cow position: | chr16:10438882-10439180 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 199 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 27, 85 |
Conread position: | 191-483 |
Cow position: | chr16:15185701-15186001 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 200 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 191-483 |
Cow position: | chr16:25442254-25442551 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 205 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 27, 135 |
Conread position: | 191-483 |
Cow position: | chr16:25456854-25456559 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 27, 94 |
Conread position: | 199-483 |
Cow position: | chr16:46500835-46501125 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 199 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 201-495 |
Cow position: | chr16:10568290-10568572 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 200 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 88, 28 |
Conread position: | 203-465 |
Cow position: | chr16:3088563-3088301 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 175 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-465 |
Cow position: | chr16:54324698-54324432 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 178 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 37, 14 |
Conread position: | 203-477 |
Cow position: | chr16:19779010-19778736 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 203-477 |
Cow position: | chr16:27594145-27594423 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 192 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 204-483 |
Cow position: | chr16:37480217-37479934 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 189 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 206-480 |
Cow position: | chr16:43896622-43896343 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 192 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 11, 120 |
Conread position: | 206-482 |
Cow position: | chr16:36087774-36087500 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 183 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 36, 63 |
Conread position: | 208-475 |
Cow position: | chr16:19664129-19663859 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 52, 114 |
Conread position: | 217-470 |
Cow position: | chr16:5662489-5662746 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 177 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 22, 255 |
Conread position: | 217-477 |
Cow position: | chr16:2726562-2726299 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 183 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 13, 189 |
Conread position: | 217-477 |
Cow position: | chr16:28196591-28196325 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 177 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-483 |
Cow position: | chr16:2238114-2237847 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 183 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 22, 154 |
Conread position: | 217-483 |
Cow position: | chr16:5527735-5527463 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 188 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 217-483 |
Cow position: | chr16:27732732-27732460 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 187 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 17, 133 |
Conread position: | 217-483 |
Cow position: | chr16:32937172-32937442 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 179 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 12, 224 |
Conread position: | 217-483 |
Cow position: | chr16:40295510-40295241 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 188 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 13, 92 |
Conread position: | 218-474 |
Cow position: | chr16:41762476-41762736 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 176 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 19, 108 |
Conread position: | 219-477 |
Cow position: | chr16:28470413-28470154 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 186 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 78, 18 |
Conread position: | 219-480 |
Cow position: | chr16:23983957-23984219 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 181 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 79, 18 |
Conread position: | 220-483 |
Cow position: | chr16:1959962-1959700 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 178 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 18, 157 |
Conread position: | 225-453 |
Cow position: | chr16:1566795-1566563 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 158 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 5, 100 |
Conread position: | 225-477 |
Cow position: | chr16:23671367-23671615 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 169 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 75, 99 |
Conread position: | 225-483 |
Cow position: | chr16:23535231-23534979 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 179 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 32, 58 |
Conread position: | 225-501 |
Cow position: | chr16:12537288-12537004 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 200 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 22, 49 |
Conread position: | 237-483 |
Cow position: | chr16:49255556-49255311 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 169 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 46 |
Conread position: | 321-465 |
Cow position: | chr16:36789781-36789927 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 107 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 321-477 |
Cow position: | chr16:5119261-5119103 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 113 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 322-482 |
Cow position: | chr16:4367845-4368005 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 55, 78 |
Conread position: | 324-504 |
Cow position: | chr16:32779187-32778999 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 62, 113 |
Show alignments to all cow chromosomes.