Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 113-502 |
| Cow position: | chr19:19178820-19178410 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 321 |
| Conread position: | 122-481 |
| Cow position: | chr19:14249667-14250045 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 34, 191 |
| Conread position: | 163-501 |
| Cow position: | chr19:2272724-2272391 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 164-503 |
| Cow position: | chr19:9706780-9706439 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 167-480 |
| Cow position: | chr19:4386998-4387307 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 167-483 |
| Cow position: | chr19:39391904-39392218 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 119 |
| Conread position: | 191-470 |
| Cow position: | chr19:39667126-39666854 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 191-483 |
| Cow position: | chr19:33942981-33943276 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 203-477 |
| Cow position: | chr19:16319204-16318926 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | chr19:32210648-32210372 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 203-483 |
| Cow position: | chr19:7343495-7343776 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 204-465 |
| Cow position: | chr19:205933-206198 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 204-483 |
| Cow position: | chr19:892208-891927 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 208-483 |
| Cow position: | chr19:32139949-32139675 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 217-477 |
| Cow position: | chr19:5900072-5899806 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-480 |
| Cow position: | chr19:166691-166422 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 160 |
| Conread position: | 217-501 |
| Cow position: | chr19:12774541-12774829 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 271 |
| Conread position: | 219-483 |
| Cow position: | chr19:33874859-33875120 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 219-483 |
| Cow position: | chr19:39184097-39183836 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 224-483 |
| Cow position: | chr19:28580223-28579966 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 225-476 |
| Cow position: | chr19:23400776-23400539 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 106 |
| Conread position: | 225-483 |
| Cow position: | chr19:437993-437730 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 226-483 |
| Cow position: | chr19:788845-789099 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 226-503 |
| Cow position: | chr19:30756667-30756950 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 236-476 |
| Cow position: | chr19:48860298-48860061 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 238-483 |
| Cow position: | chr19:39758-40006 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 242-472 |
| Cow position: | chr19:774069-774300 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 227 |
| Conread position: | 243-481 |
| Cow position: | chr19:52843020-52843250 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 251-483 |
| Cow position: | chr19:40816034-40815802 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 356-504 |
| Cow position: | chr19:44032049-44032204 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 88 |
Show alignments to all cow chromosomes.