Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 118-484 |
| Cow position: | chr20:27896753-27896377 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 120-480 |
| Cow position: | chr20:12569796-12570175 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 122-482 |
| Cow position: | chr20:20410281-20409906 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 123, 53 |
| Conread position: | 191-483 |
| Cow position: | chr20:5536315-5536614 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-483 |
| Cow position: | chr20:17660370-17660075 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 191-483 |
| Cow position: | chr20:21916007-21916307 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 201-483 |
| Cow position: | chr20:8972793-8972508 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 203-477 |
| Cow position: | chr20:30429657-30429936 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-491 |
| Cow position: | chr20:19439302-19439590 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 204-483 |
| Cow position: | chr20:13764284-13764565 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 217-483 |
| Cow position: | chr20:12437023-12436750 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 217-483 |
| Cow position: | chr20:13769258-13769516 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 217-483 |
| Cow position: | chr20:23468264-23467998 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 217-483 |
| Cow position: | chr20:29949927-29950195 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 219-477 |
| Cow position: | chr20:27870613-27870872 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 220-483 |
| Cow position: | chr20:23800289-23800553 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 222-481 |
| Cow position: | chr20:31308433-31308690 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 224-483 |
| Cow position: | chr20:28162230-28162495 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 225-481 |
| Cow position: | chr20:5937743-5937488 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 225-504 |
| Cow position: | chr20:5691810-5691525 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 242-477 |
| Cow position: | chr20:26054264-26054026 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 242-504 |
| Cow position: | chr20:824197-824466 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 251-462 |
| Cow position: | chr20:21717860-21718074 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 251-483 |
| Cow position: | chr20:35126096-35126332 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 262-483 |
| Cow position: | chr20:30687022-30687255 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 274-483 |
| Cow position: | chr20:925958-925742 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.