Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 115-483 |
| Cow position: | chr23:16498026-16497641 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 331 |
| Conread position: | 117-483 |
| Cow position: | chr23:1012587-1012212 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 163 |
| Conread position: | 120-483 |
| Cow position: | chr23:4361238-4361597 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 88 |
| Conread position: | 158-480 |
| Cow position: | chr23:16055038-16055377 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 164-482 |
| Cow position: | chr23:14263160-14263464 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 167-458 |
| Cow position: | chr23:4639301-4639011 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 177-465 |
| Cow position: | chr23:2718607-2718901 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 191-465 |
| Cow position: | chr23:22167955-22168228 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 191-477 |
| Cow position: | chr23:23172088-23172377 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 191-483 |
| Cow position: | chr23:965186-964888 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-483 |
| Cow position: | chr23:2759209-2759505 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 191-483 |
| Cow position: | chr23:4818334-4818629 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 95 |
| Conread position: | 191-483 |
| Cow position: | chr23:15526885-15527184 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-484 |
| Cow position: | chr23:5873264-5872964 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 197-480 |
| Cow position: | chr23:15218569-15218284 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 197-483 |
| Cow position: | chr23:2025763-2025475 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 203-477 |
| Cow position: | chr23:11714543-11714265 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | chr23:41141904-41141626 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 203-480 |
| Cow position: | chr23:28218748-28219029 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 204-483 |
| Cow position: | chr23:4513807-4514090 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 204-483 |
| Cow position: | chr23:4890015-4890289 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 211-465 |
| Cow position: | chr23:31164143-31164391 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 217-445 |
| Cow position: | chr23:19949251-19949019 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 217-465 |
| Cow position: | chr23:22145971-22145718 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 217-477 |
| Cow position: | chr23:7314245-7314511 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-483 |
| Cow position: | chr23:3879751-3879479 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 219-477 |
| Cow position: | chr23:11780125-11780380 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 220-465 |
| Cow position: | chr23:20154888-20154639 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 224-483 |
| Cow position: | chr23:36030035-36029773 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 225-443 |
| Cow position: | chr23:14777614-14777401 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 225-477 |
| Cow position: | chr23:38691832-38692092 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 225-483 |
| Cow position: | chr23:15178415-15178670 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 225-483 |
| Cow position: | chr23:26838166-26838425 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 8, 116 |
| Conread position: | 229-483 |
| Cow position: | chr23:19490903-19491158 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 251-470 |
| Cow position: | chr23:35274016-35274240 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 251-483 |
| Cow position: | chr23:1957540-1957777 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 262-477 |
| Cow position: | chr23:32351379-32351161 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 264-465 |
| Cow position: | chr23:14961564-14961364 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 113, 9 |
| Conread position: | 267-480 |
| Cow position: | chr23:28304303-28304519 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 312-483 |
| Cow position: | chr23:14972522-14972349 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.