Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 120-491 |
| Cow position: | chr25:11041629-11042010 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 180 |
| Conread position: | 164-480 |
| Cow position: | chr25:11931455-11931139 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 164-483 |
| Cow position: | chr25:25508036-25508366 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 172-529 |
| Cow position: | chr25:20774025-20773666 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 191-483 |
| Cow position: | chr25:12941311-12941014 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 243 |
| Conread position: | 196-480 |
| Cow position: | chr25:25543285-25543564 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 203-483 |
| Cow position: | chr25:19339223-19338941 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 217-466 |
| Cow position: | chr25:18178075-18178326 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 217-477 |
| Cow position: | chr25:13062323-13062057 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-477 |
| Cow position: | chr25:13693281-13693015 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-477 |
| Cow position: | chr25:20346596-20346330 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-480 |
| Cow position: | chr25:18888357-18888088 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 217-480 |
| Cow position: | chr25:19921931-19922196 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 160 |
| Conread position: | 217-483 |
| Cow position: | chr25:17559176-17558906 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 219-483 |
| Cow position: | chr25:34345606-34345345 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 139 |
| Conread position: | 220-483 |
| Cow position: | chr25:18486172-18485909 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 224-483 |
| Cow position: | chr25:13782441-13782706 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 228-483 |
| Cow position: | chr25:22148944-22149200 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 237-464 |
| Cow position: | chr25:30757069-30756847 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 237-502 |
| Cow position: | chr25:30149303-30149043 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 171 |
| Conread position: | 240-513 |
| Cow position: | chr25:10944174-10943899 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 242-465 |
| Cow position: | chr25:18192344-18192120 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 251-477 |
| Cow position: | chr25:20631048-20631277 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 252-483 |
| Cow position: | chr25:13794001-13793773 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 69 |
| Conread position: | 262-477 |
| Cow position: | chr25:32580957-32581175 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 262-483 |
| Cow position: | chr25:4533066-4532850 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 266-475 |
| Cow position: | chr25:19408247-19408451 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 361-491 |
| Cow position: | chr25:25102890-25102760 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 102, 20 |
Show alignments to all cow chromosomes.