Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 116-482 |
| Cow position: | chr27:3104952-3105348 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 120-483 |
| Cow position: | chr27:9991982-9991604 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 35, 221 |
| Conread position: | 123-465 |
| Cow position: | chr27:23292496-23292847 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 255 |
| Conread position: | 139-504 |
| Cow position: | chr27:16967272-16966894 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 195 |
| Conread position: | 164-483 |
| Cow position: | chr27:167635-167316 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 164-483 |
| Cow position: | chr27:26326348-26326673 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 167-483 |
| Cow position: | chr27:1210648-1210968 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 172-477 |
| Cow position: | chr27:798268-797961 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 177-483 |
| Cow position: | chr27:13898614-13898924 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 140 |
| Conread position: | 191-483 |
| Cow position: | chr27:4980684-4980984 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 191-483 |
| Cow position: | chr27:19524867-19525157 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 191-503 |
| Cow position: | chr27:15274753-15274435 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 197-483 |
| Cow position: | chr27:12748359-12748648 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 204-477 |
| Cow position: | chr27:9331063-9331340 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 206-483 |
| Cow position: | chr27:26554093-26553829 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 217-477 |
| Cow position: | chr27:19260039-19260304 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 219-472 |
| Cow position: | chr27:27664348-27664594 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 220-453 |
| Cow position: | chr27:5912255-5912499 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 224-477 |
| Cow position: | chr27:16033056-16032797 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 224-483 |
| Cow position: | chr27:15635991-15635731 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 225-477 |
| Cow position: | chr27:8199156-8199414 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 226-500 |
| Cow position: | chr27:16611612-16611341 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 230-482 |
| Cow position: | chr27:22150300-22150553 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 240-461 |
| Cow position: | chr27:1575962-1576187 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 164 |
| Conread position: | 242-477 |
| Cow position: | chr27:29056528-29056766 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 288-475 |
| Cow position: | chr27:9386495-9386682 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 298-477 |
| Cow position: | chr27:1900613-1900432 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.