Cow genome map

Conread name: Ss1.1-Utr1-UTR010024A10.5

Conread position: 120-465
Cow position: chr28:7741705-7742070 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 233

Conread position: 122-477
Cow position: chr28:591671-591309 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 25

Conread position: 122-477
Cow position: chr28:29539853-29539480 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 220

Conread position: 122-483
Cow position: chr28:18146473-18146089 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 184

Conread position: 122-502
Cow position: chr28:919247-918870 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 245
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 45

Conread position: 122-502
Cow position: chr28:934937-934562 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 45

Conread position: 164-477
Cow position: chr28:33253645-33253964 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 36

Conread position: 164-483
Cow position: chr28:8380369-8380693 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 11

Conread position: 167-483
Cow position: chr28:15034778-15034455 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 175-483
Cow position: chr28:7760470-7760771 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 125, 45

Conread position: 191-450
Cow position: chr28:10471023-10471278 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 134

Conread position: 191-465
Cow position: chr28:17665950-17665670 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 191-483
Cow position: chr28:784020-784313 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 85

Conread position: 191-483
Cow position: chr28:3190895-3190596 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 219

Conread position: 191-483
Cow position: chr28:17389759-17390057 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 135

Conread position: 191-483
Cow position: chr28:22259793-22259498 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 135

Conread position: 192-483
Cow position: chr28:14704027-14703727 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 197-477
Cow position: chr28:484227-483944 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 20

Conread position: 203-476
Cow position: chr28:1954732-1955004 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 14

Conread position: 203-477
Cow position: chr28:22041911-22041635 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 14

Conread position: 203-483
Cow position: chr28:24590229-24590513 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 20

Conread position: 203-501
Cow position: chr28:6537438-6537138 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 14

Conread position: 204-465
Cow position: chr28:10580495-10580237 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 13

Conread position: 204-483
Cow position: chr28:1506243-1506522 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 171, 33

Conread position: 206-482
Cow position: chr28:9269194-9269462 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 36

Conread position: 211-502
Cow position: chr28:27679523-27679821 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 166

Conread position: 217-480
Cow position: chr28:5750315-5750050 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 67

Conread position: 217-480
Cow position: chr28:5938872-5939141 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 217-483
Cow position: chr28:1216446-1216179 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 107

Conread position: 217-483
Cow position: chr28:1813545-1813278 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 108

Conread position: 217-483
Cow position: chr28:2085849-2086121 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 217-495
Cow position: chr28:5799675-5799956 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 271

Conread position: 217-577
Cow position: chr28:9180001-9180355 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 160

Conread position: 219-478
Cow position: chr28:33384506-33384250 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 21

Conread position: 219-480
Cow position: chr28:32791000-32790746 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 18

Conread position: 219-483
Cow position: chr28:33637933-33638200 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 74, 16

Conread position: 220-480
Cow position: chr28:1386015-1385757 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 16

Conread position: 224-480
Cow position: chr28:18519051-18518794 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 69, 13

Conread position: 224-501
Cow position: chr28:12151726-12151998 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 11

Conread position: 224-512
Cow position: chr28:5112733-5112440 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 225-508
Cow position: chr28:18100102-18099810 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 99

Conread position: 237-483
Cow position: chr28:5766136-5766387 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 163

Conread position: 242-477
Cow position: chr28:1459507-1459745 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 263-483
Cow position: chr28:12408792-12408571 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 147

Conread position: 282-477
Cow position: chr28:9288402-9288597 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 112

Conread position: 284-483
Cow position: chr28:13461425-13461627 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 307-503
Cow position: chr28:24541546-24541746 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 58

Show alignments to all cow chromosomes.