Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010024A10.5 |
| Conread position: | 118-483 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 120-470 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 120-483 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 33, 207 |
| Conread position: | 120-483 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 120-502 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 269 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 127-461 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 229 |
| Conread position: | 127-476 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 127-483 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 159-478 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 164-427 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 164-477 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 164-483 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 165-483 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 166-504 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 168-477 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 191-453 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 219 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 191-483 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 196-482 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 196-483 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 203 |
| Conread position: | 196-487 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 197-503 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 203-453 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 203-477 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 204-483 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 217-477 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 217-477 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-477 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 217-480 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 217-483 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 217-503 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 219-464 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 219-483 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 220-483 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 220-483 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 220-498 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 220-501 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 221-426 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 224-477 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 224-480 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 258 |
| Conread position: | 224-483 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 225-453 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 225-482 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 225-483 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 225-483 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 230-503 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 237-480 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 240-476 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 242-477 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 250-470 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 262-476 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 263-480 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 276-501 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 278-477 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.