Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010033B05.5 |
| Conread position: | 4-220 |
| Cow position: | chr3:64892331-64892547 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-198 |
| Cow position: | chr3:64855883-64856075 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-216 |
| Cow position: | chr3:64829282-64829464 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 220-384 |
| Cow position: | chr3:57471374-57471538 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-384 |
| Cow position: | chr3:64896971-64897135 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-378 |
| Cow position: | chr3:64834145-64834301 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 111 |
| Conread position: | 222-384 |
| Cow position: | chr3:64865556-64865718 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 382-534 |
| Cow position: | chr3:64899298-64899450 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 134 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-540 |
| Cow position: | chr3:64868294-64868452 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 117 |
| Conread position: | 382-545 |
| Cow position: | chr3:57474041-57474204 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 140 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-545 |
| Cow position: | chr3:64837141-64837304 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 137 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-545 |
| Cow position: | chr3:64981470-64981633 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 139 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 533-694 |
| Cow position: | chr3:57474579-57474740 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 533-694 |
| Cow position: | chr3:64868700-64868861 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 533-694 |
| Cow position: | chr3:64899841-64900002 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 533-694 |
| Cow position: | chr3:64981992-64982153 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-692 |
| Cow position: | chr3:64837677-64837829 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 689-871 |
| Cow position: | chr3:64901750-64901932 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 692-871 |
| Cow position: | chr3:64870272-64870451 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 692-877 |
| Cow position: | chr3:64842239-64842416 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 692-878 |
| Cow position: | chr3:57476956-57477142 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 692-878 |
| Cow position: | chr3:64984998-64985184 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 694-852 |
| Cow position: | chr3:64901216-64901374 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 870-1013 |
| Cow position: | chr3:57439278-57439421 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 870-1013 |
| Cow position: | chr3:57491150-57491293 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 870-1013 |
| Cow position: | chr3:64873020-64873163 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 870-1013 |
| Cow position: | chr3:64903591-64903734 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1008-1203 |
| Cow position: | chr3:64873509-64873703 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 1012-1203 |
| Cow position: | chr3:57439766-57439956 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 1012-1203 |
| Cow position: | chr3:57491614-57491804 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 1012-1203 |
| Cow position: | chr3:64904068-64904258 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
Show alignments to all cow chromosomes.