Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 448-714
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 100

Conread position: 482-783
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 484-629
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 80

Conread position: 484-686
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 60

Conread position: 486-746
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 68

Conread position: 487-703
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 487-716
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 183

Conread position: 490-620
Cow position:
Alignm length: 131
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 490-623
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 490-682
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 490-703
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 92

Conread position: 490-707
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 129, 68

Conread position: 490-715
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 128, 92

Conread position: 490-747
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 490-747
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 76, 250

Conread position: 490-780
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 490-785
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 231

Conread position: 490-787
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 20

Conread position: 491-612
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 491-615
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 44

Conread position: 491-623
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 491-703
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 55

Conread position: 491-703
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 491-711
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 57

Conread position: 491-729
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 213

Conread position: 491-747
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 259

Conread position: 491-781
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 16

Conread position: 492-611
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 97

Conread position: 492-615
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 492-615
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 492-618
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 492-618
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 492-623
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 492-699
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 492-703
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 127

Conread position: 492-703
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 39

Conread position: 492-709
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 492-714
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 123, 90

Conread position: 492-715
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 42

Conread position: 492-715
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 124, 93

Conread position: 492-721
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 26

Conread position: 492-747
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 57

Conread position: 492-780
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 65

Conread position: 493-615
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 493-615
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 493-620
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 96

Conread position: 493-623
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 493-623
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 493-684
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 493-685
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 189

Conread position: 493-690
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 493-703
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 493-703
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 88, 186

Conread position: 493-714
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 67

Conread position: 493-715
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 493-716
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 53

Conread position: 493-736
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 61

Conread position: 493-745
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 92

Conread position: 493-746
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 229

Conread position: 493-747
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 68

Conread position: 493-747
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 93

Conread position: 493-747
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 247

Conread position: 493-747
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 200

Conread position: 493-747
Cow position:
Alignm length: 277
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 172

Conread position: 493-754
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 213

Conread position: 493-757
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 493-760
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 69

Conread position: 493-779
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 493-781
Cow position:
Alignm length: 296
Alignm identity: 203
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 211, 89

Conread position: 494-623
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 494-701
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 494-706
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 59

Conread position: 494-716
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 151

Conread position: 494-747
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 0

Conread position: 494-747
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 123, 218

Conread position: 494-781
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 214

Conread position: 494-787
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 123, 277

Conread position: 495-615
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 495-615
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 495-715
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 87

Conread position: 495-715
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 495-747
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 223

Conread position: 495-747
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 125, 194

Conread position: 495-748
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 496-747
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 233

Conread position: 504-747
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 505-747
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 509-748
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 37

Conread position: 517-719
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 136, 17

Conread position: 527-715
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 527-747
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 81

Conread position: 528-746
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 538-729
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 49

Conread position: 577-755
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 95

Conread position: 579-746
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 126

Conread position: 600-771
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 602-749
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 604-780
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 6, 104

Conread position: 605-768
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 608-746
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 93, 108

Conread position: 609-760
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 609-771
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 609-782
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 612-746
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 612-746
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 614-747
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 8

Conread position: 614-787
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 617-747
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 5

Conread position: 617-789
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 5

Conread position: 618-747
Cow position:
Alignm length: 132
Alignm identity: 112
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 91

Conread position: 618-747
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 618-755
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 19

Conread position: 618-780
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 618-780
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 98

Conread position: 621-754
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 622-774
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 623-771
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 14

Conread position: 623-785
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 50

Conread position: 623-785
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 625-747
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 627-745
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 92

Conread position: 627-747
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 636-781
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 644-785
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 670-781
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.