Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010038D04.5 |
| Conread position: | 448-714 |
| Cow position: | chr1:101822657-101822385 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 174, 100 |
| Conread position: | 482-783 |
| Cow position: | chr1:69695116-69694794 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 484-629 |
| Cow position: | chr1:9013419-9013560 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 484-686 |
| Cow position: | chr1:40482523-40482312 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 486-746 |
| Cow position: | chr1:54156850-54156567 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 487-703 |
| Cow position: | chr1:42545903-42545661 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 487-716 |
| Cow position: | chr1:4180738-4180510 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 79, 183 |
| Conread position: | 490-620 |
| Cow position: | chr1:87936785-87936915 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-623 |
| Cow position: | chr1:2976108-2975976 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 490-682 |
| Cow position: | chr1:90640917-90641125 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 490-703 |
| Cow position: | chr1:100706019-100706244 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 490-707 |
| Cow position: | chr1:30418152-30417925 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 129, 68 |
| Conread position: | 490-715 |
| Cow position: | chr1:80422166-80422403 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 128, 92 |
| Conread position: | 490-747 |
| Cow position: | chr1:15333770-15334056 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 490-747 |
| Cow position: | chr1:93528584-93528862 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 76, 250 |
| Conread position: | 490-780 |
| Cow position: | chr1:53520797-53521115 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 490-785 |
| Cow position: | chr1:68827019-68826710 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 231 |
| Conread position: | 490-787 |
| Cow position: | chr1:1877917-1878234 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 491-612 |
| Cow position: | chr1:6961795-6961917 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 491-615 |
| Cow position: | chr1:80631589-80631710 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 491-623 |
| Cow position: | chr1:89485462-89485599 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 491-703 |
| Cow position: | chr1:8349428-8349206 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 491-703 |
| Cow position: | chr1:76470542-76470761 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 491-711 |
| Cow position: | chr1:68245420-68245193 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 491-729 |
| Cow position: | chr1:87888287-87888532 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 213 |
| Conread position: | 491-747 |
| Cow position: | chr1:54199495-54199226 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 259 |
| Conread position: | 491-781 |
| Cow position: | chr1:34686078-34686376 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 16 |
| Conread position: | 492-611 |
| Cow position: | chr1:48444306-48444186 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 97 |
| Conread position: | 492-615 |
| Cow position: | chr1:51684689-51684819 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 492-615 |
| Cow position: | chr1:79165197-79165070 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 492-618 |
| Cow position: | chr1:3243826-3243951 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 492-618 |
| Cow position: | chr1:53425063-53425191 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 492-623 |
| Cow position: | chr1:35162297-35162430 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 492-699 |
| Cow position: | chr1:61543030-61542805 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 492-703 |
| Cow position: | chr1:65909415-65909628 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 492-703 |
| Cow position: | chr1:98594466-98594683 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 492-709 |
| Cow position: | chr1:95215293-95215066 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 492-714 |
| Cow position: | chr1:3137817-3138043 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 123, 90 |
| Conread position: | 492-715 |
| Cow position: | chr1:48730937-48730702 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 492-715 |
| Cow position: | chr1:55357397-55357165 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 124, 93 |
| Conread position: | 492-721 |
| Cow position: | chr1:95100851-95101075 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 492-747 |
| Cow position: | chr1:33720007-33720272 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 492-780 |
| Cow position: | chr1:10778454-10778764 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 112, 65 |
| Conread position: | 493-615 |
| Cow position: | chr1:77683246-77683364 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 493-615 |
| Cow position: | chr1:100770860-100770741 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 493-620 |
| Cow position: | chr1:93810318-93810446 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 493-623 |
| Cow position: | chr1:24445739-24445607 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 493-623 |
| Cow position: | chr1:93228415-93228545 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-684 |
| Cow position: | chr1:43703296-43703508 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 493-685 |
| Cow position: | chr1:57264107-57263909 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 189 |
| Conread position: | 493-690 |
| Cow position: | chr1:62291802-62291596 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 493-703 |
| Cow position: | chr1:75933161-75933384 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 493-703 |
| Cow position: | chr1:84240781-84240998 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 88, 186 |
| Conread position: | 493-714 |
| Cow position: | chr1:39069066-39068824 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 493-715 |
| Cow position: | chr1:84239224-84238992 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 493-716 |
| Cow position: | chr1:21835834-21836063 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 493-736 |
| Cow position: | chr1:101280827-101280580 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 493-745 |
| Cow position: | chr1:96472334-96472581 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 493-746 |
| Cow position: | chr1:3607699-3607962 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 92, 229 |
| Conread position: | 493-747 |
| Cow position: | chr1:3923906-3923636 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 493-747 |
| Cow position: | chr1:6304974-6304709 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 98, 93 |
| Conread position: | 493-747 |
| Cow position: | chr1:11729070-11729339 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 247 |
| Conread position: | 493-747 |
| Cow position: | chr1:77720346-77720092 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 129, 200 |
| Conread position: | 493-747 |
| Cow position: | chr1:91066264-91065989 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 87, 172 |
| Conread position: | 493-754 |
| Cow position: | chr1:45555253-45555541 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 213 |
| Conread position: | 493-757 |
| Cow position: | chr1:24534365-24534083 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 493-760 |
| Cow position: | chr1:95056944-95057221 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 69 |
| Conread position: | 493-779 |
| Cow position: | chr1:101632450-101632143 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 493-781 |
| Cow position: | chr1:101789183-101788891 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 211, 89 |
| Conread position: | 494-623 |
| Cow position: | chr1:45535595-45535727 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 494-701 |
| Cow position: | chr1:43822290-43822515 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 494-706 |
| Cow position: | chr1:34771614-34771382 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 494-716 |
| Cow position: | chr1:43447942-43447719 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 494-747 |
| Cow position: | chr1:43855191-43855457 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 494-747 |
| Cow position: | chr1:90595663-90595409 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 218 |
| Conread position: | 494-781 |
| Cow position: | chr1:20667852-20667539 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 90, 214 |
| Conread position: | 494-787 |
| Cow position: | chr1:99642476-99642161 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 277 |
| Conread position: | 495-615 |
| Cow position: | chr1:45288981-45288859 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 495-615 |
| Cow position: | chr1:57635352-57635474 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 495-715 |
| Cow position: | chr1:49839396-49839615 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 128, 87 |
| Conread position: | 495-715 |
| Cow position: | chr1:53671850-53671619 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 495-747 |
| Cow position: | chr1:71045645-71045903 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 223 |
| Conread position: | 495-747 |
| Cow position: | chr1:100817446-100817709 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 194 |
| Conread position: | 495-748 |
| Cow position: | chr1:100741177-100741451 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 496-747 |
| Cow position: | chr1:56477479-56477753 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 233 |
| Conread position: | 504-747 |
| Cow position: | chr1:72105311-72105571 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 505-747 |
| Cow position: | chr1:42541497-42541760 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 509-748 |
| Cow position: | chr1:55818966-55819207 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 517-719 |
| Cow position: | chr1:1165515-1165721 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 527-715 |
| Cow position: | chr1:68672677-68672471 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 527-747 |
| Cow position: | chr1:45019885-45019638 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 528-746 |
| Cow position: | chr1:98583681-98583915 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 538-729 |
| Cow position: | chr1:3130596-3130405 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 577-755 |
| Cow position: | chr1:99629149-99629339 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 579-746 |
| Cow position: | chr1:96362437-96362268 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 600-771 |
| Cow position: | chr1:96932288-96932458 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 602-749 |
| Cow position: | chr1:93385092-93385246 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 604-780 |
| Cow position: | chr1:84787286-84787470 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 104 |
| Conread position: | 605-768 |
| Cow position: | chr1:42291945-42292115 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 608-746 |
| Cow position: | chr1:100551998-100552133 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 609-760 |
| Cow position: | chr1:45449326-45449478 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 609-771 |
| Cow position: | chr1:82917451-82917282 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 609-782 |
| Cow position: | chr1:91810770-91810948 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 612-746 |
| Cow position: | chr1:6941493-6941633 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 612-746 |
| Cow position: | chr1:6958906-6959046 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 614-747 |
| Cow position: | chr1:98557089-98556950 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 614-787 |
| Cow position: | chr1:41022448-41022633 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 617-747 |
| Cow position: | chr1:7739981-7740110 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 617-789 |
| Cow position: | chr1:97611627-97611454 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 618-747 |
| Cow position: | chr1:61011213-61011343 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 5, 91 |
| Conread position: | 618-747 |
| Cow position: | chr1:63460910-63461046 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 618-755 |
| Cow position: | chr1:63079042-63079177 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 618-780 |
| Cow position: | chr1:32014228-32014401 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 618-780 |
| Cow position: | chr1:81638580-81638745 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 98 |
| Conread position: | 621-754 |
| Cow position: | chr1:242593-242728 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 622-774 |
| Cow position: | chr1:83606413-83606252 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 623-771 |
| Cow position: | chr1:59675642-59675795 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 623-785 |
| Cow position: | chr1:23332866-23332700 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 623-785 |
| Cow position: | chr1:101151595-101151764 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 625-747 |
| Cow position: | chr1:75227280-75227157 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 627-745 |
| Cow position: | chr1:70044394-70044510 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 627-747 |
| Cow position: | chr1:52370130-52370013 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 636-781 |
| Cow position: | chr1:54645478-54645634 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 644-785 |
| Cow position: | chr1:87220514-87220657 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 670-781 |
| Cow position: | chr1:69458572-69458460 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.