Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 484-715
Cow position: chr10:15427216-15426980 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 20

Conread position: 485-787
Cow position: chr10:25681-26003 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 45

Conread position: 486-623
Cow position: chr10:35653522-35653661 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 48

Conread position: 487-612
Cow position: chr10:43508844-43508970 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 487-663
Cow position: chr10:35767229-35767041 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 91

Conread position: 487-787
Cow position: chr10:42312760-42313089 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 26

Conread position: 490-610
Cow position: chr10:43438730-43438853 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 490-619
Cow position: chr10:50200570-50200698 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 490-695
Cow position: chr10:53934880-53934672 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 81

Conread position: 490-702
Cow position: chr10:49045699-49045926 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 490-703
Cow position: chr10:65132815-65133032 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 157

Conread position: 491-702
Cow position: chr10:19104314-19104101 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 76

Conread position: 491-716
Cow position: chr10:22049117-22049357 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 491-747
Cow position: chr10:15868107-15868393 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 16

Conread position: 491-747
Cow position: chr10:30787755-30787487 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 49

Conread position: 491-785
Cow position: chr10:47542945-47543255 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 89, 42

Conread position: 491-790
Cow position: chr10:20372269-20371941 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 492-620
Cow position: chr10:4109448-4109576 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 87

Conread position: 492-623
Cow position: chr10:24871023-24871155 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 492-623
Cow position: chr10:54948278-54948147 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 103

Conread position: 492-630
Cow position: chr10:51313860-51313998 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 66

Conread position: 492-703
Cow position: chr10:29166141-29166361 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 46

Conread position: 492-715
Cow position: chr10:61839453-61839684 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 178

Conread position: 492-734
Cow position: chr10:48462480-48462221 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 492-747
Cow position: chr10:40420983-40420717 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 42

Conread position: 492-747
Cow position: chr10:41132130-41132400 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 41

Conread position: 492-756
Cow position: chr10:23912637-23912365 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 125, 48

Conread position: 492-780
Cow position: chr10:35904966-35904670 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 186

Conread position: 492-781
Cow position: chr10:2202266-2201954 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 493-615
Cow position: chr10:24276874-24276749 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 493-618
Cow position: chr10:37528746-37528619 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 493-623
Cow position: chr10:54476965-54477093 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 493-648
Cow position: chr10:25045828-25045670 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 46

Conread position: 493-671
Cow position: chr10:24548115-24548306 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 493-701
Cow position: chr10:46184609-46184826 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 33

Conread position: 493-702
Cow position: chr10:64839152-64838941 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 17

Conread position: 493-704
Cow position: chr10:33733009-33732783 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 493-715
Cow position: chr10:6173217-6173435 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 53

Conread position: 493-715
Cow position: chr10:10148513-10148750 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 493-715
Cow position: chr10:24732172-24732406 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 125, 48

Conread position: 493-716
Cow position: chr10:31779412-31779168 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 229

Conread position: 493-746
Cow position: chr10:32503307-32503568 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 77

Conread position: 493-746
Cow position: chr10:37295806-37295534 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 493-746
Cow position: chr10:54848635-54848914 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 493-747
Cow position: chr10:50183190-50182916 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 493-753
Cow position: chr10:10720814-10720527 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 221

Conread position: 493-786
Cow position: chr10:34661455-34661146 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 78

Conread position: 493-787
Cow position: chr10:69567713-69568008 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 82, 22

Conread position: 493-788
Cow position: chr10:12315015-12315313 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 170

Conread position: 494-697
Cow position: chr10:47788888-47789101 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 494-714
Cow position: chr10:24132960-24132723 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 94, 153

Conread position: 494-714
Cow position: chr10:39110144-39109917 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 67

Conread position: 494-745
Cow position: chr10:7304433-7304701 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 186

Conread position: 494-745
Cow position: chr10:51289119-51289380 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 36

Conread position: 494-745
Cow position: chr10:58557056-58557304 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 17

Conread position: 494-747
Cow position: chr10:19402795-19403051 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 201, 95

Conread position: 494-747
Cow position: chr10:24422302-24422034 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 19

Conread position: 494-778
Cow position: chr10:10468841-10469141 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 65

Conread position: 495-736
Cow position: chr10:6235568-6235330 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 8

Conread position: 495-747
Cow position: chr10:55518577-55518829 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 169

Conread position: 495-758
Cow position: chr10:24561126-24560841 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 63

Conread position: 496-612
Cow position: chr10:17983047-17983163 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 496-781
Cow position: chr10:39387321-39387629 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 32, 91

Conread position: 497-715
Cow position: chr10:668745-668967 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 61

Conread position: 502-784
Cow position: chr10:14396776-14396474 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 286

Conread position: 510-746
Cow position: chr10:69934892-69934644 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 25

Conread position: 510-747
Cow position: chr10:45729062-45728823 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 94

Conread position: 527-747
Cow position: chr10:3275882-3276106 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 43

Conread position: 536-760
Cow position: chr10:15424955-15425186 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 185

Conread position: 538-749
Cow position: chr10:26631326-26631541 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 21

Conread position: 540-782
Cow position: chr10:10137773-10138042 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 47

Conread position: 543-748
Cow position: chr10:13918344-13918129 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 171

Conread position: 551-715
Cow position: chr10:33311558-33311385 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 577-729
Cow position: chr10:46172078-46171926 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 7

Conread position: 587-747
Cow position: chr10:6268647-6268815 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 590-789
Cow position: chr10:10476720-10476515 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 111, 19

Conread position: 600-768
Cow position: chr10:282192-282366 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 18

Conread position: 606-771
Cow position: chr10:39852878-39852708 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 36

Conread position: 606-787
Cow position: chr10:7089338-7089527 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 140, 104

Conread position: 609-771
Cow position: chr10:15570203-15570371 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 609-771
Cow position: chr10:27259136-27258967 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 609-775
Cow position: chr10:36775360-36775187 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 609-787
Cow position: chr10:23478934-23478753 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 97, 18

Conread position: 613-771
Cow position: chr10:51740493-51740659 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 614-781
Cow position: chr10:30261607-30261431 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 160

Conread position: 614-783
Cow position: chr10:15871873-15871708 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 617-746
Cow position: chr10:54699702-54699568 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 5

Conread position: 618-758
Cow position: chr10:37709014-37708875 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 5, 98

Conread position: 618-780
Cow position: chr10:13927736-13927903 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 139

Conread position: 618-787
Cow position: chr10:58638016-58638193 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 68

Conread position: 621-747
Cow position: chr10:41115911-41116038 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 621-781
Cow position: chr10:6555799-6555639 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 66

Conread position: 622-746
Cow position: chr10:17448191-17448069 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 622-746
Cow position: chr10:24971319-24971194 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 622-747
Cow position: chr10:58149162-58149032 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 622-758
Cow position: chr10:64285787-64285649 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 622-781
Cow position: chr10:37400429-37400590 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 55

Conread position: 622-782
Cow position: chr10:17149887-17150047 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 108

Conread position: 622-787
Cow position: chr10:10634226-10634393 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 623-771
Cow position: chr10:16417592-16417438 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 623-771
Cow position: chr10:64198728-64198882 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 47

Conread position: 624-779
Cow position: chr10:25045953-25046113 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 120

Conread position: 644-781
Cow position: chr10:14638801-14638662 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 57

Show alignments to all cow chromosomes.