Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010038D04.5 |
| Conread position: | 72-250 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 482-623 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 482-746 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 482-758 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 484-715 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 221 |
| Conread position: | 484-749 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 92, 244 |
| Conread position: | 486-737 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 103 |
| Conread position: | 486-758 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 487-747 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 489-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 490-615 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 490-623 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 490-707 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 490-713 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 126, 88 |
| Conread position: | 490-787 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 490-794 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 91, 74 |
| Conread position: | 491-615 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 491-615 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 491-716 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 44 |
| Conread position: | 491-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 91 |
| Conread position: | 492-612 |
| Cow position: | |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 492-615 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 492-615 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 492-615 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 492-633 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 492-689 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 492-715 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 85, 215 |
| Conread position: | 492-716 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 492-719 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 86, 215 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 220 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 80, 227 |
| Conread position: | 492-787 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 492-787 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 285 |
| Conread position: | 493-615 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 493-615 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-615 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 493-616 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 493-620 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 493-623 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 493-694 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 493-703 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 493-714 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 493-715 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 493-715 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 493-716 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 493-746 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 493-746 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 211 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 118, 90 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 184 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 493-749 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 215 |
| Conread position: | 493-781 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 494-706 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 199 |
| Conread position: | 494-747 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 84, 261 |
| Conread position: | 494-747 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 89, 230 |
| Conread position: | 502-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 505-716 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 509-747 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 525-747 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 193 |
| Conread position: | 527-746 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 538-787 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 539-787 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 542-715 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 600-785 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 173 |
| Conread position: | 600-787 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 600-787 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 609-785 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 614-746 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 614-809 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 617-747 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 5 |
| Conread position: | 618-747 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 618-747 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 621-747 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 622-747 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 622-748 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 622-780 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 56 |
| Conread position: | 622-781 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 622-787 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 623-746 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 623-768 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 623-771 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 626-781 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 639-786 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 644-782 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 704-1516 |
| Cow position: | |
| Alignm length: | 848 |
| Alignm identity: | 641 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 235 |
Show alignments to all cow chromosomes.