Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 478-747
Cow position: chr2:70908448-70908170 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 51

Conread position: 482-615
Cow position: chr2:29159783-29159913 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 484-612
Cow position: chr2:31119906-31120038 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 484-614
Cow position: chr2:69828960-69828830 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 59

Conread position: 484-754
Cow position: chr2:21049441-21049164 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 73

Conread position: 485-694
Cow position: chr2:55062759-55062981 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 485-781
Cow position: chr2:21860-21549 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 119

Conread position: 486-623
Cow position: chr2:6267898-6267762 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 80

Conread position: 486-694
Cow position: chr2:46194672-46194885 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 157

Conread position: 487-704
Cow position: chr2:6282136-6281927 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 488-703
Cow position: chr2:28303203-28303432 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 85

Conread position: 489-716
Cow position: chr2:61421290-61421041 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 490-615
Cow position: chr2:34535276-34535150 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 490-615
Cow position: chr2:70780977-70781101 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 490-702
Cow position: chr2:44232570-44232341 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 490-704
Cow position: chr2:70895913-70896149 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 490-747
Cow position: chr2:24271113-24271377 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 135, 88

Conread position: 490-747
Cow position: chr2:44550958-44550692 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 52

Conread position: 491-612
Cow position: chr2:12802790-12802670 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 491-615
Cow position: chr2:387893-387769 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 491-684
Cow position: chr2:16564569-16564771 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 185

Conread position: 491-713
Cow position: chr2:47073075-47073311 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 16

Conread position: 491-715
Cow position: chr2:47152652-47152427 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 70

Conread position: 491-716
Cow position: chr2:7383798-7383562 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 203

Conread position: 491-716
Cow position: chr2:32408609-32408384 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 91, 69

Conread position: 491-748
Cow position: chr2:7524253-7523970 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 492-623
Cow position: chr2:19104849-19104720 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 43

Conread position: 492-623
Cow position: chr2:23493420-23493552 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 492-623
Cow position: chr2:54790165-54790296 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 492-624
Cow position: chr2:46020788-46020921 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 492-707
Cow position: chr2:41954766-41955003 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 203

Conread position: 492-746
Cow position: chr2:78116464-78116198 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 128

Conread position: 492-768
Cow position: chr2:37113322-37113013 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 492-781
Cow position: chr2:44482764-44482465 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 193

Conread position: 492-781
Cow position: chr2:50580255-50580539 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 203

Conread position: 492-795
Cow position: chr2:27178539-27178861 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 125, 90

Conread position: 493-615
Cow position: chr2:55960728-55960604 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 493-616
Cow position: chr2:51594647-51594773 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 493-618
Cow position: chr2:80797554-80797675 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 493-623
Cow position: chr2:62644472-62644602 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 493-628
Cow position: chr2:51824807-51824945 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 493-682
Cow position: chr2:28318970-28318780 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 64

Conread position: 493-703
Cow position: chr2:2590068-2589843 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 493-707
Cow position: chr2:23847942-23847718 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 53

Conread position: 493-714
Cow position: chr2:6697612-6697381 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 188

Conread position: 493-716
Cow position: chr2:80963763-80963524 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 493-745
Cow position: chr2:15250064-15250328 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 41

Conread position: 493-746
Cow position: chr2:24593754-24594023 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 493-746
Cow position: chr2:45542512-45542240 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 493-747
Cow position: chr2:40597463-40597735 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 38

Conread position: 493-747
Cow position: chr2:42255319-42255593 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 493-747
Cow position: chr2:45367177-45367442 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 49

Conread position: 493-747
Cow position: chr2:73545011-73544742 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 26

Conread position: 493-753
Cow position: chr2:16428514-16428232 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 24

Conread position: 493-754
Cow position: chr2:73282673-73282406 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 493-779
Cow position: chr2:27173253-27173557 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 179

Conread position: 493-780
Cow position: chr2:45478701-45478397 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 133

Conread position: 493-780
Cow position: chr2:66480305-66479995 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 493-780
Cow position: chr2:68239117-68239406 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 88

Conread position: 493-785
Cow position: chr2:30351818-30351493 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 32

Conread position: 493-786
Cow position: chr2:17328632-17328949 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 68

Conread position: 493-792
Cow position: chr2:46312335-46312651 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 91, 297

Conread position: 493-816
Cow position: chr2:55632661-55633012 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 95

Conread position: 494-618
Cow position: chr2:45281534-45281660 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 494-703
Cow position: chr2:47098049-47097840 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 126, 36

Conread position: 494-778
Cow position: chr2:41185357-41185652 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 53

Conread position: 495-713
Cow position: chr2:45439326-45439558 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 184

Conread position: 495-787
Cow position: chr2:4016954-4016651 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 287

Conread position: 496-682
Cow position: chr2:988580-988779 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 62

Conread position: 497-747
Cow position: chr2:40257528-40257254 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 498-694
Cow position: chr2:29734711-29734923 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 192

Conread position: 498-747
Cow position: chr2:19138005-19137728 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 509-787
Cow position: chr2:80275394-80275081 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 510-771
Cow position: chr2:38658882-38658601 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 63, 223

Conread position: 510-786
Cow position: chr2:60462920-60462626 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 163

Conread position: 510-786
Cow position: chr2:60468299-60468005 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 163

Conread position: 515-725
Cow position: chr2:39663279-39663504 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 516-747
Cow position: chr2:80177677-80177435 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 28

Conread position: 525-707
Cow position: chr2:19502564-19502367 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 26

Conread position: 528-734
Cow position: chr2:29859928-29860151 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 538-716
Cow position: chr2:41710790-41710982 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 605-788
Cow position: chr2:43139639-43139448 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 7

Conread position: 607-782
Cow position: chr2:39384644-39384463 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 98

Conread position: 609-765
Cow position: chr2:72126757-72126920 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 609-771
Cow position: chr2:5479674-5479507 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 57

Conread position: 609-771
Cow position: chr2:52151236-52151073 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 609-785
Cow position: chr2:10842724-10842545 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 166

Conread position: 609-787
Cow position: chr2:68998337-68998522 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 614-746
Cow position: chr2:50913992-50913853 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 614-759
Cow position: chr2:49931853-49932005 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 617-782
Cow position: chr2:46015943-46015773 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 5

Conread position: 618-771
Cow position: chr2:10710287-10710128 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 618-774
Cow position: chr2:24722244-24722078 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 621-746
Cow position: chr2:64465745-64465615 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 622-746
Cow position: chr2:69350533-69350406 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 622-747
Cow position: chr2:21950007-21950137 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 622-748
Cow position: chr2:39350457-39350325 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 11

Conread position: 623-767
Cow position: chr2:72612470-72612621 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 623-779
Cow position: chr2:6341068-6340916 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 43

Conread position: 625-770
Cow position: chr2:6258313-6258159 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 627-746
Cow position: chr2:15871972-15872092 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 641-780
Cow position: chr2:8798109-8798253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 106

Conread position: 647-782
Cow position: chr2:13721949-13722090 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 650-747
Cow position: chr2:33603446-33603547 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.