Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010038D04.5 |
| Conread position: | 473-703 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 143 |
| Conread position: | 484-612 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 484-615 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 485-784 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 486-620 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 486-787 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 487-618 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 487-704 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 30 |
| Conread position: | 487-787 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 290 |
| Conread position: | 490-614 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 490-620 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 490-740 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 490-781 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 491-615 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 491-623 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 491-715 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 491-716 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 491-742 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 491-747 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 122, 84 |
| Conread position: | 491-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 141, 88 |
| Conread position: | 491-787 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 492-615 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 492-633 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 122 |
| Conread position: | 492-692 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 492-702 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 492-704 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 492-715 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 113 |
| Conread position: | 492-715 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 200 |
| Conread position: | 492-736 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 91, 163 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 493-612 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 493-623 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 493-696 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 107, 66 |
| Conread position: | 493-697 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 127, 73 |
| Conread position: | 493-703 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 73 |
| Conread position: | 493-716 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 88 |
| Conread position: | 493-746 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 493-780 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 494-701 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 494-702 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 126, 82 |
| Conread position: | 494-703 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 92, 112 |
| Conread position: | 494-747 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 181 |
| Conread position: | 494-758 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 177 |
| Conread position: | 494-781 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 89, 232 |
| Conread position: | 495-703 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 157 |
| Conread position: | 495-714 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 495-747 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 496-747 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 195 |
| Conread position: | 497-715 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 211 |
| Conread position: | 498-624 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 500-627 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 509-787 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 171 |
| Conread position: | 510-746 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 519-771 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 225 |
| Conread position: | 535-747 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 600-760 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 600-771 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 609-787 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 109 |
| Conread position: | 614-747 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 622-746 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 622-746 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 622-768 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 622-781 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 622-783 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 83 |
| Conread position: | 623-771 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 624-781 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 626-787 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 68 |
Show alignments to all cow chromosomes.