Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 474-623
Cow position: chr23:1254554-1254704 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 62

Conread position: 484-623
Cow position: chr23:22574041-22573902 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 484-703
Cow position: chr23:38208599-38208840 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 189

Conread position: 485-615
Cow position: chr23:1670778-1670911 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 485-745
Cow position: chr23:2457342-2457594 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 134, 51

Conread position: 486-620
Cow position: chr23:34356521-34356654 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 486-685
Cow position: chr23:4562763-4562982 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 486-745
Cow position: chr23:29242828-29243095 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 71

Conread position: 486-771
Cow position: chr23:39573379-39573067 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 83, 50

Conread position: 487-623
Cow position: chr23:15710194-15710062 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 487-715
Cow position: chr23:4327811-4327574 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 489-612
Cow position: chr23:1928912-1929037 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 490-615
Cow position: chr23:38973728-38973859 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 490-703
Cow position: chr23:6592818-6592594 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 220

Conread position: 490-703
Cow position: chr23:16700157-16699927 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 130, 76

Conread position: 490-747
Cow position: chr23:1655776-1656059 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 266

Conread position: 490-762
Cow position: chr23:21446001-21446294 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 97, 0

Conread position: 490-781
Cow position: chr23:10852933-10853255 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 491-612
Cow position: chr23:23113914-23114038 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 491-615
Cow position: chr23:1921343-1921218 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 491-623
Cow position: chr23:22804608-22804741 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 491-623
Cow position: chr23:37065725-37065866 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 491-703
Cow position: chr23:5162310-5162544 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 491-715
Cow position: chr23:7596449-7596226 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 150

Conread position: 492-623
Cow position: chr23:36172406-36172535 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 492-686
Cow position: chr23:25378538-25378744 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 492-703
Cow position: chr23:1767712-1767945 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 492-707
Cow position: chr23:9734298-9734528 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 86

Conread position: 492-715
Cow position: chr23:38455298-38455050 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 492-760
Cow position: chr23:5723428-5723715 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 88, 199

Conread position: 492-781
Cow position: chr23:23409623-23409923 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 117, 89

Conread position: 493-614
Cow position: chr23:3247469-3247589 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 493-615
Cow position: chr23:9713204-9713331 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 493-615
Cow position: chr23:14164517-14164389 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 493-615
Cow position: chr23:33153305-33153184 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 493-615
Cow position: chr23:33711646-33711769 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 493-623
Cow position: chr23:28945180-28945052 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 493-694
Cow position: chr23:2055590-2055786 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 132

Conread position: 493-694
Cow position: chr23:10014423-10014632 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 85, 203

Conread position: 493-707
Cow position: chr23:344290-344069 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 84, 157

Conread position: 493-715
Cow position: chr23:13511620-13511853 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 83, 33

Conread position: 493-715
Cow position: chr23:18296693-18296935 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 493-746
Cow position: chr23:1337416-1337143 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 182

Conread position: 493-746
Cow position: chr23:4968638-4968363 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 94

Conread position: 493-746
Cow position: chr23:33601643-33601376 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 147

Conread position: 493-747
Cow position: chr23:22530530-22530272 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 69

Conread position: 493-754
Cow position: chr23:1636163-1636441 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 109

Conread position: 494-623
Cow position: chr23:18402403-18402273 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 494-623
Cow position: chr23:19371186-19371058 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 89

Conread position: 494-703
Cow position: chr23:13599230-13599455 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 494-747
Cow position: chr23:29345872-29345612 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 40

Conread position: 495-699
Cow position: chr23:17796422-17796215 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 124

Conread position: 495-747
Cow position: chr23:3522639-3522907 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 20

Conread position: 495-748
Cow position: chr23:6223874-6224136 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 40

Conread position: 501-785
Cow position: chr23:6035334-6035621 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 30

Conread position: 503-623
Cow position: chr23:27544723-27544844 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 517-723
Cow position: chr23:32040284-32040483 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 547-714
Cow position: chr23:35503723-35503898 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 10

Conread position: 585-787
Cow position: chr23:987553-987341 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 189

Conread position: 588-771
Cow position: chr23:22674423-22674245 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 31

Conread position: 609-787
Cow position: chr23:2046967-2047151 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 618-781
Cow position: chr23:17484817-17484649 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 37

Conread position: 618-786
Cow position: chr23:18417121-18417289 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 5, 101

Conread position: 619-787
Cow position: chr23:16968078-16968248 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 10

Conread position: 621-787
Cow position: chr23:1954312-1954488 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 622-746
Cow position: chr23:3293729-3293853 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 63

Conread position: 622-746
Cow position: chr23:7709824-7709946 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 622-779
Cow position: chr23:35929984-35930154 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 622-781
Cow position: chr23:39248354-39248193 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 58

Conread position: 623-771
Cow position: chr23:15262613-15262761 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 135

Conread position: 624-746
Cow position: chr23:1490396-1490517 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 636-735
Cow position: chr23:16447641-16447541 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 636-785
Cow position: chr23:21664352-21664513 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 648-748
Cow position: chr23:22651466-22651565 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.