Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010038D04.5 |
| Conread position: | 450-715 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 482-615 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 489-703 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 69 |
| Conread position: | 490-604 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 490-703 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 138 |
| Conread position: | 490-715 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 490-747 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 491-623 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 491-703 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 491-745 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 216 |
| Conread position: | 491-747 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 491-747 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 492-612 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 492-614 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 492-682 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 492-684 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 492-719 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 194 |
| Conread position: | 492-779 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 493-615 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 493-615 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 493-703 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 184 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 124, 89 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 132, 85 |
| Conread position: | 493-748 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 493-771 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 494-615 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 494-701 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 494-747 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 495-634 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 495-747 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 85, 222 |
| Conread position: | 496-747 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 497-703 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 509-747 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 212 |
| Conread position: | 510-786 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 112, 126 |
| Conread position: | 519-748 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 524-745 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 536-746 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 165, 49 |
| Conread position: | 544-781 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 577-733 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 592-787 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 602-768 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 606-716 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 101, 88 |
| Conread position: | 607-771 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 609-774 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 609-784 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 618-746 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 100 |
| Conread position: | 622-716 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 622-746 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 622-747 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 623-771 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 644-747 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.