Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 484-615
Cow position: chr7:31881867-31882001 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 490-615
Cow position: chr7:39529071-39528943 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 490-703
Cow position: chr7:58351037-58350812 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 490-747
Cow position: chr7:25860271-25859998 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 56

Conread position: 490-747
Cow position: chr7:28563458-28563193 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 20

Conread position: 490-747
Cow position: chr7:65597679-65597418 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 17

Conread position: 491-615
Cow position: chr7:24718607-24718483 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 70

Conread position: 491-715
Cow position: chr7:58923320-58923565 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 491-779
Cow position: chr7:50075801-50075513 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 133, 40

Conread position: 491-780
Cow position: chr7:50372032-50372331 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 41

Conread position: 492-609
Cow position: chr7:39401883-39402001 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 492-623
Cow position: chr7:5300466-5300335 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 23

Conread position: 492-623
Cow position: chr7:40303341-40303209 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 492-690
Cow position: chr7:2896688-2896901 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 492-691
Cow position: chr7:5212554-5212334 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 492-693
Cow position: chr7:11869915-11869696 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 492-713
Cow position: chr7:25512199-25511959 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 103

Conread position: 492-715
Cow position: chr7:32711052-32710818 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 125, 169

Conread position: 492-715
Cow position: chr7:44986575-44986820 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 179

Conread position: 492-747
Cow position: chr7:4892790-4893053 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 45

Conread position: 492-747
Cow position: chr7:69132876-69133162 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 492-754
Cow position: chr7:11066399-11066683 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 231

Conread position: 492-771
Cow position: chr7:24220594-24220888 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 54

Conread position: 492-780
Cow position: chr7:45592963-45593250 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 12

Conread position: 493-615
Cow position: chr7:48020345-48020468 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 493-627
Cow position: chr7:9800278-9800413 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 493-703
Cow position: chr7:31881601-31881814 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 493-715
Cow position: chr7:13593691-13593937 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 493-715
Cow position: chr7:23090205-23089980 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 493-716
Cow position: chr7:5853283-5853518 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 42

Conread position: 493-732
Cow position: chr7:64949037-64949289 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 87, 159

Conread position: 493-745
Cow position: chr7:8375197-8375445 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 35

Conread position: 493-747
Cow position: chr7:23251638-23251380 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 206

Conread position: 493-747
Cow position: chr7:40308591-40308313 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 92

Conread position: 493-748
Cow position: chr7:34554189-34554455 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 53

Conread position: 493-787
Cow position: chr7:14450265-14450579 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 111, 92

Conread position: 493-787
Cow position: chr7:21240189-21239877 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 89

Conread position: 494-615
Cow position: chr7:7476526-7476399 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 494-703
Cow position: chr7:45747919-45747699 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 494-703
Cow position: chr7:53606397-53606179 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 58

Conread position: 494-707
Cow position: chr7:2816197-2816417 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 162

Conread position: 494-715
Cow position: chr7:23636632-23636869 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 494-787
Cow position: chr7:48721977-48721652 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 167

Conread position: 495-610
Cow position: chr7:23616040-23615927 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 495-615
Cow position: chr7:18253428-18253549 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 495-703
Cow position: chr7:42894372-42894603 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 71

Conread position: 495-747
Cow position: chr7:25263301-25263574 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 256

Conread position: 495-747
Cow position: chr7:30017590-30017318 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 39

Conread position: 496-785
Cow position: chr7:600262-600567 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 70, 218

Conread position: 498-708
Cow position: chr7:65122272-65122492 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 502-716
Cow position: chr7:25867554-25867332 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 35

Conread position: 509-747
Cow position: chr7:32807404-32807651 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 114, 16

Conread position: 509-779
Cow position: chr7:42636921-42637196 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 234

Conread position: 516-781
Cow position: chr7:15855371-15855096 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 107, 66

Conread position: 528-746
Cow position: chr7:37394270-37394502 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 42

Conread position: 528-774
Cow position: chr7:33385881-33386156 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 540-748
Cow position: chr7:11176745-11176530 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 569-778
Cow position: chr7:37003818-37004028 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 141

Conread position: 602-771
Cow position: chr7:7680729-7680898 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 7

Conread position: 605-786
Cow position: chr7:41869371-41869185 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 605-788
Cow position: chr7:10403804-10403624 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 100

Conread position: 607-771
Cow position: chr7:35296084-35295922 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 609-771
Cow position: chr7:1356131-1355962 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 609-771
Cow position: chr7:24008385-24008220 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 609-771
Cow position: chr7:51072495-51072334 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 49

Conread position: 609-771
Cow position: chr7:53211278-53211447 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 609-786
Cow position: chr7:46003276-46003091 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 609-786
Cow position: chr7:53532737-53532564 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 61

Conread position: 610-747
Cow position: chr7:29505174-29505316 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 615-745
Cow position: chr7:40110863-40110735 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 91

Conread position: 617-783
Cow position: chr7:10397285-10397109 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 16

Conread position: 618-745
Cow position: chr7:34464426-34464556 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 618-746
Cow position: chr7:5906702-5906838 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 618-768
Cow position: chr7:39639838-39639680 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 620-746
Cow position: chr7:1761802-1761933 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 620-747
Cow position: chr7:5401711-5401837 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 14

Conread position: 621-787
Cow position: chr7:53996372-53996551 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 622-736
Cow position: chr7:4764918-4765032 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 622-747
Cow position: chr7:38357567-38357445 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 94

Conread position: 623-747
Cow position: chr7:68144591-68144713 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 623-781
Cow position: chr7:48020502-48020672 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 624-748
Cow position: chr7:14486150-14486269 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 625-747
Cow position: chr7:5724256-5724379 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 628-787
Cow position: chr7:11962052-11961883 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 645-779
Cow position: chr7:36590405-36590268 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.