Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010038D04.5 |
| Conread position: | 484-615 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 490-615 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 490-703 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 490-747 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 490-747 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 490-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 491-615 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 491-715 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 491-779 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 133, 40 |
| Conread position: | 491-780 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 492-609 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 492-623 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 492-690 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 492-691 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 492-693 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 492-713 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 103 |
| Conread position: | 492-715 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 125, 169 |
| Conread position: | 492-715 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 179 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 492-754 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 231 |
| Conread position: | 492-771 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 492-780 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 493-615 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 493-627 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 493-703 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 493-715 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 493-715 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 493-716 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 493-732 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 87, 159 |
| Conread position: | 493-745 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 206 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 493-748 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 493-787 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 111, 92 |
| Conread position: | 493-787 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 89 |
| Conread position: | 494-615 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 494-703 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 494-703 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 494-707 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 494-715 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 494-787 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 167 |
| Conread position: | 495-610 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 495-615 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 495-703 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 71 |
| Conread position: | 495-747 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 256 |
| Conread position: | 495-747 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 496-785 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 70, 218 |
| Conread position: | 498-708 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 502-716 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 509-747 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 509-779 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 234 |
| Conread position: | 516-781 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 107, 66 |
| Conread position: | 528-746 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 528-774 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 540-748 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 569-778 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 602-771 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 605-786 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 605-788 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 100 |
| Conread position: | 607-771 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 49 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 609-786 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 609-786 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 610-747 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 615-745 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 617-783 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 618-745 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 618-746 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 618-768 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 620-746 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 620-747 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 621-787 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 622-736 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 622-747 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 94 |
| Conread position: | 623-747 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 623-781 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 624-748 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 625-747 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 628-787 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 645-779 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.