Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 477-623
Cow position: chr8:13723287-13723434 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 24

Conread position: 482-747
Cow position: chr8:55095766-55096045 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 99, 19

Conread position: 482-747
Cow position: chr8:61128813-61128528 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 8

Conread position: 484-612
Cow position: chr8:48775703-48775833 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 484-623
Cow position: chr8:9229997-9229859 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 487-785
Cow position: chr8:48513120-48512811 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 28

Conread position: 488-786
Cow position: chr8:53633339-53633021 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 76, 229

Conread position: 490-612
Cow position: chr8:20157875-20157746 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 490-623
Cow position: chr8:28412725-28412588 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 490-624
Cow position: chr8:8323980-8323844 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 490-714
Cow position: chr8:3922825-3922581 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 490-780
Cow position: chr8:37809735-37809449 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 209

Conread position: 491-626
Cow position: chr8:37148012-37148150 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 491-703
Cow position: chr8:4940417-4940196 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 19

Conread position: 491-715
Cow position: chr8:7149802-7149565 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 97, 34

Conread position: 491-716
Cow position: chr8:37882237-37882482 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 491-725
Cow position: chr8:37347567-37347308 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 491-747
Cow position: chr8:37571812-37571530 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 492-612
Cow position: chr8:1834814-1834935 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 492-613
Cow position: chr8:1327325-1327446 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 66

Conread position: 492-615
Cow position: chr8:24471542-24471669 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 492-615
Cow position: chr8:31253704-31253830 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 492-620
Cow position: chr8:20926748-20926615 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 492-692
Cow position: chr8:225474-225269 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 155

Conread position: 492-694
Cow position: chr8:37862471-37862685 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 126, 95

Conread position: 492-711
Cow position: chr8:20837017-20837251 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 221

Conread position: 492-715
Cow position: chr8:36465099-36465314 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 125

Conread position: 492-747
Cow position: chr8:1023857-1024133 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 492-747
Cow position: chr8:19642363-19642640 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 90

Conread position: 492-747
Cow position: chr8:33125397-33125667 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 80, 38

Conread position: 492-755
Cow position: chr8:23586062-23585781 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 91, 0

Conread position: 492-756
Cow position: chr8:45878931-45879211 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 50

Conread position: 492-756
Cow position: chr8:45925513-45925793 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 50

Conread position: 493-611
Cow position: chr8:48422710-48422829 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 493-614
Cow position: chr8:44437659-44437779 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 493-618
Cow position: chr8:19011902-19011775 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 493-620
Cow position: chr8:21826859-21826727 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 493-623
Cow position: chr8:51480937-51480806 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 493-703
Cow position: chr8:16060979-16061191 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 125, 53

Conread position: 493-703
Cow position: chr8:18207241-18207020 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 68

Conread position: 493-712
Cow position: chr8:41905724-41905499 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 38

Conread position: 493-712
Cow position: chr8:41914632-41914407 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 38

Conread position: 493-715
Cow position: chr8:25388035-25388273 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 493-715
Cow position: chr8:37334065-37334299 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 64

Conread position: 493-725
Cow position: chr8:13321729-13321489 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 97

Conread position: 493-747
Cow position: chr8:15391269-15390995 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 84, 235

Conread position: 493-747
Cow position: chr8:28378863-28378592 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 493-774
Cow position: chr8:24871979-24871680 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 153

Conread position: 493-781
Cow position: chr8:5893836-5894142 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 207

Conread position: 494-676
Cow position: chr8:5225145-5224949 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 494-694
Cow position: chr8:56507394-56507191 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 120, 84

Conread position: 494-703
Cow position: chr8:11078764-11078982 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 180

Conread position: 494-747
Cow position: chr8:38711494-38711760 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 494-748
Cow position: chr8:40032920-40032650 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 494-781
Cow position: chr8:36375616-36375306 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 50

Conread position: 494-787
Cow position: chr8:6233004-6232676 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 308

Conread position: 496-716
Cow position: chr8:21077483-21077721 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 502-747
Cow position: chr8:4500393-4500661 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 509-747
Cow position: chr8:53552587-53552845 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 113, 69

Conread position: 516-787
Cow position: chr8:43163788-43163500 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 217

Conread position: 519-754
Cow position: chr8:39845538-39845786 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 201

Conread position: 527-782
Cow position: chr8:19698572-19698857 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 536-781
Cow position: chr8:29958338-29958614 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 259

Conread position: 539-780
Cow position: chr8:58417626-58417888 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 251

Conread position: 544-747
Cow position: chr8:19860715-19860505 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 171

Conread position: 546-787
Cow position: chr8:43112898-43112635 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 177

Conread position: 591-747
Cow position: chr8:19784869-19785031 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 602-760
Cow position: chr8:33020235-33020400 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 606-813
Cow position: chr8:29173234-29173459 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 11

Conread position: 609-771
Cow position: chr8:21058058-21057890 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 61

Conread position: 609-771
Cow position: chr8:24427172-24427004 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 609-787
Cow position: chr8:25649652-25649475 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 99

Conread position: 612-787
Cow position: chr8:1586441-1586616 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 36

Conread position: 614-746
Cow position: chr8:36860504-36860638 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 66

Conread position: 614-761
Cow position: chr8:40696908-40697066 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 614-773
Cow position: chr8:4821145-4820990 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 617-747
Cow position: chr8:48524921-48524795 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 618-747
Cow position: chr8:45149754-45149630 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 621-745
Cow position: chr8:55089808-55089683 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 622-747
Cow position: chr8:31265868-31265738 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 622-747
Cow position: chr8:36034926-36034792 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 622-767
Cow position: chr8:10846281-10846419 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 622-781
Cow position: chr8:39898739-39898902 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 623-790
Cow position: chr8:36471364-36471541 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 627-782
Cow position: chr8:55348381-55348536 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 652-779
Cow position: chr8:1161830-1161705 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.