Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010038D04.5 |
| Conread position: | 477-623 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 482-747 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 482-747 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 8 |
| Conread position: | 484-612 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 484-623 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 487-785 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 488-786 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 76, 229 |
| Conread position: | 490-612 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 490-623 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 490-624 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 490-714 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 490-780 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 209 |
| Conread position: | 491-626 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 491-703 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 491-715 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 491-716 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 491-725 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 491-747 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 492-612 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 492-613 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 492-615 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 492-615 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 492-620 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 492-692 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 155 |
| Conread position: | 492-694 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 126, 95 |
| Conread position: | 492-711 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 221 |
| Conread position: | 492-715 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 90 |
| Conread position: | 492-747 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 492-755 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 492-756 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 492-756 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 493-611 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 493-614 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 493-618 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 493-620 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 493-623 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 493-703 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 493-703 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 68 |
| Conread position: | 493-712 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 493-712 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 493-715 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 493-715 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 493-725 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 235 |
| Conread position: | 493-747 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 493-774 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 493-781 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 207 |
| Conread position: | 494-676 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 494-694 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 120, 84 |
| Conread position: | 494-703 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 180 |
| Conread position: | 494-747 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 494-748 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 494-781 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 494-787 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 308 |
| Conread position: | 496-716 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 502-747 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 509-747 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 516-787 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 217 |
| Conread position: | 519-754 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 201 |
| Conread position: | 527-782 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 536-781 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 259 |
| Conread position: | 539-780 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 41, 251 |
| Conread position: | 544-747 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 171 |
| Conread position: | 546-787 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 177 |
| Conread position: | 591-747 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 602-760 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 606-813 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 609-771 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 609-787 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 99 |
| Conread position: | 612-787 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 614-746 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 66 |
| Conread position: | 614-761 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 614-773 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 617-747 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 618-747 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 621-745 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 622-747 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 622-747 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 622-767 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 622-781 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 623-790 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 627-782 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 652-779 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.