Cow genome map

Conread name: Ss1.1-Utr1-UTR010038D04.5

Conread position: 463-623
Cow position: chr9:15225119-15225281 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 118

Conread position: 482-787
Cow position: chr9:22433783-22434109 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 23

Conread position: 484-612
Cow position: chr9:5069219-5069092 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 484-621
Cow position: chr9:41283168-41283032 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 484-793
Cow position: chr9:34284104-34283772 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 71

Conread position: 487-713
Cow position: chr9:17310410-17310654 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 217

Conread position: 487-747
Cow position: chr9:22443475-22443756 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 99

Conread position: 488-787
Cow position: chr9:33697180-33696874 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 93, 43

Conread position: 490-705
Cow position: chr9:3774311-3774079 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 490-707
Cow position: chr9:52001154-52000932 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 183

Conread position: 490-713
Cow position: chr9:3070271-3070502 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 194

Conread position: 490-716
Cow position: chr9:55074984-55075224 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 490-787
Cow position: chr9:32732540-32732841 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 29

Conread position: 491-625
Cow position: chr9:35305969-35306104 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 129

Conread position: 491-703
Cow position: chr9:63745959-63745732 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 70

Conread position: 491-709
Cow position: chr9:33093101-33092870 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 61

Conread position: 491-715
Cow position: chr9:21888315-21888074 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 91

Conread position: 491-747
Cow position: chr9:61847002-61847248 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 75

Conread position: 491-787
Cow position: chr9:40215390-40215071 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 84, 92

Conread position: 492-615
Cow position: chr9:32711076-32710952 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 492-618
Cow position: chr9:35533805-35533933 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 492-697
Cow position: chr9:7363170-7362951 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 43

Conread position: 492-703
Cow position: chr9:37678031-37677811 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 23

Conread position: 492-707
Cow position: chr9:37069422-37069646 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 492-713
Cow position: chr9:40542266-40542042 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 119, 68

Conread position: 492-715
Cow position: chr9:54528659-54528418 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 492-729
Cow position: chr9:27279456-27279199 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 492-745
Cow position: chr9:19034487-19034223 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 74

Conread position: 492-746
Cow position: chr9:26057294-26057562 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 492-747
Cow position: chr9:51720755-51721020 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 227

Conread position: 492-747
Cow position: chr9:63784780-63785042 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 48

Conread position: 492-760
Cow position: chr9:41513771-41513491 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 30

Conread position: 492-786
Cow position: chr9:11168877-11168563 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 493-613
Cow position: chr9:32812491-32812374 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 493-623
Cow position: chr9:1952122-1952255 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 493-623
Cow position: chr9:17928906-17928772 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 493-623
Cow position: chr9:31270926-31270795 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 493-690
Cow position: chr9:8524983-8524789 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 84

Conread position: 493-711
Cow position: chr9:1973088-1972856 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 493-712
Cow position: chr9:52839740-52839972 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 89

Conread position: 493-716
Cow position: chr9:23541262-23541480 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 13

Conread position: 493-732
Cow position: chr9:11299544-11299791 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 73

Conread position: 493-744
Cow position: chr9:61022757-61022491 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 105

Conread position: 493-745
Cow position: chr9:5393193-5392942 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 12

Conread position: 493-746
Cow position: chr9:20579459-20579720 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 38

Conread position: 493-747
Cow position: chr9:54681651-54681387 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 43

Conread position: 493-785
Cow position: chr9:28773268-28772967 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 493-787
Cow position: chr9:47445880-47446189 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 69

Conread position: 493-789
Cow position: chr9:5327402-5327089 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 68

Conread position: 494-623
Cow position: chr9:11377796-11377929 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 494-714
Cow position: chr9:44467207-44467435 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 67

Conread position: 494-767
Cow position: chr9:43871124-43870833 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 242

Conread position: 496-703
Cow position: chr9:10819689-10819911 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 496-715
Cow position: chr9:38846200-38846428 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 5, 9

Conread position: 496-747
Cow position: chr9:47869150-47868891 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 44

Conread position: 497-618
Cow position: chr9:60081048-60080925 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 497-688
Cow position: chr9:54178290-54178488 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 498-787
Cow position: chr9:13670774-13670460 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 28

Conread position: 499-784
Cow position: chr9:1877867-1878177 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 100

Conread position: 509-744
Cow position: chr9:57896988-57897233 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 211

Conread position: 510-727
Cow position: chr9:34901979-34902206 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 219

Conread position: 522-784
Cow position: chr9:27345487-27345762 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 23

Conread position: 527-694
Cow position: chr9:6879885-6879705 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 535-715
Cow position: chr9:19758813-19758625 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 539-735
Cow position: chr9:22461640-22461843 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 177

Conread position: 583-715
Cow position: chr9:9243594-9243455 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 600-771
Cow position: chr9:5836784-5836612 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 600-787
Cow position: chr9:37127671-37127479 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 158

Conread position: 606-771
Cow position: chr9:9199768-9199937 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 53

Conread position: 607-785
Cow position: chr9:56855084-56854909 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 87, 52

Conread position: 609-768
Cow position: chr9:54363849-54364009 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 42

Conread position: 609-771
Cow position: chr9:10316373-10316542 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 609-771
Cow position: chr9:20525416-20525247 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 609-787
Cow position: chr9:766008-765837 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 609-787
Cow position: chr9:8967945-8967761 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 612-768
Cow position: chr9:26683422-26683585 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 618-745
Cow position: chr9:22447291-22447426 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 618-747
Cow position: chr9:25400196-25400320 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 19

Conread position: 618-747
Cow position: chr9:35295693-35295562 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 618-748
Cow position: chr9:34917182-34917311 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 100

Conread position: 618-771
Cow position: chr9:11161332-11161172 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 53

Conread position: 618-774
Cow position: chr9:56011502-56011343 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 618-781
Cow position: chr9:7805958-7806130 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 101

Conread position: 618-787
Cow position: chr9:35832616-35832792 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 77

Conread position: 622-747
Cow position: chr9:29819716-29819593 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 622-758
Cow position: chr9:42586558-42586691 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 622-767
Cow position: chr9:6392646-6392500 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 623-747
Cow position: chr9:20712833-20712705 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 624-745
Cow position: chr9:55807627-55807503 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 624-746
Cow position: chr9:9459981-9459857 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 666-787
Cow position: chr9:1338405-1338528 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.