Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 567-746 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 571-675 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 571-730 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 571-745 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 571-745 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 149 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 27, 149 |
| Conread position: | 571-746 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 571-746 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 571-748 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 25, 168 |
| Conread position: | 571-754 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 578-746 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 578-746 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 579-713 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-718 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 579-733 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 579-887 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 579-903 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 276 |
| Conread position: | 584-746 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 585-745 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 585-746 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 588-746 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 588-902 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 124, 67 |
| Conread position: | 591-746 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 747-896 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-898 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 747-911 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-912 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 754-852 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 754-912 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 755-911 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 755-911 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 35 |
Show alignments to all cow chromosomes.