Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 571-700 |
| Cow position: | chr17:30768981-30769110 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 571-722 |
| Cow position: | chr17:6881255-6881104 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 571-745 |
| Cow position: | chr17:11390867-11390685 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | chr17:3764580-3764405 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 571-746 |
| Cow position: | chr17:12552986-12553160 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 571-746 |
| Cow position: | chr17:36145584-36145754 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 571-746 |
| Cow position: | chr17:45885246-45885418 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 577-746 |
| Cow position: | chr17:26782535-26782708 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 147 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 578-744 |
| Cow position: | chr17:26222638-26222475 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 578-911 |
| Cow position: | chr17:41690730-41691054 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 579-746 |
| Cow position: | chr17:19975677-19975512 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 579-746 |
| Cow position: | chr17:21480195-21480024 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 145 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-746 |
| Cow position: | chr17:28084095-28083928 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 579-746 |
| Cow position: | chr17:44533265-44533098 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 579-911 |
| Cow position: | chr17:2694409-2694077 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 579-912 |
| Cow position: | chr17:9047983-9047613 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 280 |
| Conread position: | 582-746 |
| Cow position: | chr17:11189117-11189281 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 588-746 |
| Cow position: | chr17:25698617-25698454 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 588-912 |
| Cow position: | chr17:7329652-7329308 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 596-746 |
| Cow position: | chr17:11828697-11828847 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 111, 8 |
| Conread position: | 599-746 |
| Cow position: | chr17:37676004-37676151 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 604-746 |
| Cow position: | chr17:21424001-21423860 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 621-746 |
| Cow position: | chr17:25190682-25190556 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 747-902 |
| Cow position: | chr17:6881043-6880874 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 134 |
| Conread position: | 747-911 |
| Cow position: | chr17:25190528-25190352 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 755-893 |
| Cow position: | chr17:17448995-17448845 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 6 |
Show alignments to all cow chromosomes.