Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 571-718 |
| Cow position: | chr18:56403858-56404004 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 571-731 |
| Cow position: | chr18:56210406-56210579 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | chr18:56036736-56036906 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 571-909 |
| Cow position: | chr18:310936-311303 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 357 |
| Conread position: | 571-912 |
| Cow position: | chr18:49897996-49898356 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 223 |
| Conread position: | 577-718 |
| Cow position: | chr18:49048193-49048335 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 578-683 |
| Cow position: | chr18:32047764-32047870 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 579-710 |
| Cow position: | chr18:45118603-45118735 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 579-746 |
| Cow position: | chr18:37738105-37738270 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 579-746 |
| Cow position: | chr18:45109548-45109708 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 580-852 |
| Cow position: | chr18:39080942-39080643 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 582-746 |
| Cow position: | chr18:39547737-39547576 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 596-689 |
| Cow position: | chr18:25724147-25724240 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 604-747 |
| Cow position: | chr18:48219357-48219203 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 608-746 |
| Cow position: | chr18:22652299-22652440 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 628-746 |
| Cow position: | chr18:47274863-47274984 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 747-912 |
| Cow position: | chr18:32048103-32048283 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-912 |
| Cow position: | chr18:47275012-47275187 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 14 |
Show alignments to all cow chromosomes.