Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 568-727 |
| Cow position: | chr19:6590682-6590843 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 154 |
| Conread position: | 568-745 |
| Cow position: | chr19:54836006-54835826 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 27, 168 |
| Conread position: | 570-746 |
| Cow position: | chr19:11012997-11013177 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 571-670 |
| Cow position: | chr19:25991582-25991682 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 571-731 |
| Cow position: | chr19:49863958-49863792 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 571-732 |
| Cow position: | chr19:7582365-7582525 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 571-746 |
| Cow position: | chr19:51619098-51619276 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 571-754 |
| Cow position: | chr19:51785561-51785745 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 141, 126 |
| Conread position: | 571-887 |
| Cow position: | chr19:19013151-19012806 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 289 |
| Conread position: | 571-912 |
| Cow position: | chr19:18655707-18656084 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 142 |
| Conread position: | 574-746 |
| Cow position: | chr19:52730797-52730975 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 167 |
| Conread position: | 579-746 |
| Cow position: | chr19:9044134-9044299 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 579-746 |
| Cow position: | chr19:53493793-53493612 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 579-747 |
| Cow position: | chr19:11609382-11609554 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 147 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-857 |
| Cow position: | chr19:6555548-6555846 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 276 |
| Conread position: | 579-912 |
| Cow position: | chr19:47778035-47777675 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 315 |
| Conread position: | 582-746 |
| Cow position: | chr19:36464890-36464727 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 588-746 |
| Cow position: | chr19:25118508-25118338 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 592-747 |
| Cow position: | chr19:45578591-45578433 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 604-733 |
| Cow position: | chr19:26004365-26004238 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 608-732 |
| Cow position: | chr19:35045647-35045773 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 104, 61 |
| Conread position: | 608-747 |
| Cow position: | chr19:39626279-39626420 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 747-903 |
| Cow position: | chr19:7582567-7582738 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 747-911 |
| Cow position: | chr19:51619304-51619481 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 754-898 |
| Cow position: | chr19:23039667-23039511 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 754-901 |
| Cow position: | chr19:11609681-11609836 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 758-912 |
| Cow position: | chr19:25992189-25992354 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 758-912 |
| Cow position: | chr19:34669637-34669480 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 92, 48 |
Show alignments to all cow chromosomes.