Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 571-705 |
| Cow position: | chr23:36313896-36314030 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 571-744 |
| Cow position: | chr23:35714751-35714927 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 571-746 |
| Cow position: | chr23:6234238-6234064 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 571-746 |
| Cow position: | chr23:14151922-14152087 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 571-746 |
| Cow position: | chr23:18589456-18589630 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 571-746 |
| Cow position: | chr23:18932156-18931991 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 571-746 |
| Cow position: | chr23:30243372-30243198 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 571-746 |
| Cow position: | chr23:39566136-39566310 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 571-746 |
| Cow position: | chr23:39731205-39731387 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 575-743 |
| Cow position: | chr23:5250075-5249909 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 577-698 |
| Cow position: | chr23:40092181-40092059 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 579-713 |
| Cow position: | chr23:17228603-17228469 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 579-746 |
| Cow position: | chr23:10686525-10686353 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-746 |
| Cow position: | chr23:14321800-14321636 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 579-746 |
| Cow position: | chr23:36094326-36094497 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-746 |
| Cow position: | chr23:39014922-39014751 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-886 |
| Cow position: | chr23:5247100-5246760 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 579-889 |
| Cow position: | chr23:41269467-41269132 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 580-725 |
| Cow position: | chr23:6721026-6721172 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 580-746 |
| Cow position: | chr23:8193303-8193470 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 580-746 |
| Cow position: | chr23:15605482-15605652 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 580-746 |
| Cow position: | chr23:40709254-40709431 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 588-732 |
| Cow position: | chr23:37751504-37751646 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 124, 80 |
| Conread position: | 589-746 |
| Cow position: | chr23:19830008-19829857 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 599-746 |
| Cow position: | chr23:4861003-4861145 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 604-718 |
| Cow position: | chr23:30239776-30239661 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 72 |
| Conread position: | 605-734 |
| Cow position: | chr23:19290232-19290360 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 731-912 |
| Cow position: | chr23:18589642-18589833 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 747-898 |
| Cow position: | chr23:40092042-40091876 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 747-910 |
| Cow position: | chr23:10684955-10684777 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-911 |
| Cow position: | chr23:17228179-17228001 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 760-903 |
| Cow position: | chr23:36379624-36379779 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.