Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 570-746 |
| Cow position: | chr25:33013556-33013377 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 571-682 |
| Cow position: | chr25:34386452-34386562 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 571-733 |
| Cow position: | chr25:7051014-7050848 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 571-744 |
| Cow position: | chr25:4678331-4678160 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 571-746 |
| Cow position: | chr25:2128474-2128300 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 571-746 |
| Cow position: | chr25:5309674-5309496 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 571-746 |
| Cow position: | chr25:7768387-7768209 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 577-744 |
| Cow position: | chr25:6757672-6757836 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 578-746 |
| Cow position: | chr25:7700617-7700450 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 579-744 |
| Cow position: | chr25:17002904-17003074 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 579-746 |
| Cow position: | chr25:6983694-6983523 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-746 |
| Cow position: | chr25:7824049-7823882 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 579-746 |
| Cow position: | chr25:10937122-10937288 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 579-746 |
| Cow position: | chr25:14334373-14334538 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 579-746 |
| Cow position: | chr25:16086985-16086817 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 579-748 |
| Cow position: | chr25:7797086-7797257 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 579-912 |
| Cow position: | chr25:8086865-8086501 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 318 |
| Conread position: | 580-723 |
| Cow position: | chr25:20252431-20252577 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 598-746 |
| Cow position: | chr25:37334382-37334528 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 613-746 |
| Cow position: | chr25:9844130-9844266 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 747-850 |
| Cow position: | chr25:6983495-6983385 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 747-898 |
| Cow position: | chr25:7052864-7052699 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 747-912 |
| Cow position: | chr25:7797283-7797460 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 747-912 |
| Cow position: | chr25:20395894-20396064 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 758-912 |
| Cow position: | chr25:17003121-17003281 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 772-912 |
| Cow position: | chr25:7050771-7050629 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 35 |
Show alignments to all cow chromosomes.