Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 571-746 |
| Cow position: | chr28:13646552-13646376 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 135, 27 |
| Conread position: | 574-731 |
| Cow position: | chr28:13048755-13048916 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 577-746 |
| Cow position: | chr28:30048028-30048201 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 579-745 |
| Cow position: | chr28:5197558-5197389 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 142 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 579-745 |
| Cow position: | chr28:26860971-26861138 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 579-746 |
| Cow position: | chr28:5978843-5978677 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 579-746 |
| Cow position: | chr28:11772241-11772412 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 145 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 579-746 |
| Cow position: | chr28:18493513-18493682 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 579-746 |
| Cow position: | chr28:28417964-28417794 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 142 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 579-746 |
| Cow position: | chr28:28602481-28602316 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 579-746 |
| Cow position: | chr28:30613302-30613136 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 579-747 |
| Cow position: | chr28:33322183-33322016 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 579-912 |
| Cow position: | chr28:26290901-26290537 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 584-912 |
| Cow position: | chr28:9697315-9696952 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 604-716 |
| Cow position: | chr28:10144691-10144805 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 747-883 |
| Cow position: | chr28:12078511-12078361 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 755-903 |
| Cow position: | chr28:5709566-5709722 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 762-912 |
| Cow position: | chr28:30048249-30048411 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.