Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 571-681 |
| Cow position: | chr29:34286010-34285899 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | chr29:25453917-25454093 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | chr29:27114614-27114439 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 27, 149 |
| Conread position: | 571-746 |
| Cow position: | chr29:37209746-37209575 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 571-904 |
| Cow position: | chr29:32202111-32201755 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 574-744 |
| Cow position: | chr29:15525259-15525426 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 577-729 |
| Cow position: | chr29:11550418-11550574 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 579-746 |
| Cow position: | chr29:1762912-1762747 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 579-746 |
| Cow position: | chr29:14211885-14211709 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 579-746 |
| Cow position: | chr29:19823546-19823381 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 579-901 |
| Cow position: | chr29:4800334-4800672 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 133 |
| Conread position: | 585-892 |
| Cow position: | chr29:42504873-42504537 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 212 |
| Conread position: | 588-746 |
| Cow position: | chr29:1954129-1954288 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 52 |
| Conread position: | 600-746 |
| Cow position: | chr29:16946275-16946127 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 730-912 |
| Cow position: | chr29:20061304-20061492 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 747-903 |
| Cow position: | chr29:16946099-16945928 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 755-912 |
| Cow position: | chr29:14211650-14211481 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.