Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 568-745 |
| Cow position: | chr4:57571704-57571880 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 568-746 |
| Cow position: | chr4:57262993-57262813 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 571-744 |
| Cow position: | chr4:25586765-25586594 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 571-745 |
| Cow position: | chr4:43350851-43351029 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | chr4:13516174-13515987 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 571-746 |
| Cow position: | chr4:62309983-62309809 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 571-746 |
| Cow position: | chr4:62332602-62332423 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 571-746 |
| Cow position: | chr4:68071711-68071881 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 571-747 |
| Cow position: | chr4:10490023-10489846 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-747 |
| Cow position: | chr4:43713296-43713107 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-903 |
| Cow position: | chr4:29526-29884 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 141, 27 |
| Conread position: | 574-731 |
| Cow position: | chr4:4952366-4952207 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 579-746 |
| Cow position: | chr4:16006901-16007066 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 579-746 |
| Cow position: | chr4:41852745-41852905 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 579-746 |
| Cow position: | chr4:50629847-50629681 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 579-910 |
| Cow position: | chr4:65044901-65044541 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 580-746 |
| Cow position: | chr4:64698197-64698029 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 580-747 |
| Cow position: | chr4:67174598-67174766 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 132, 80 |
| Conread position: | 581-745 |
| Cow position: | chr4:37488855-37489022 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 581-746 |
| Cow position: | chr4:62609962-62609794 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 162 |
| Conread position: | 588-744 |
| Cow position: | chr4:34275895-34276060 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 588-747 |
| Cow position: | chr4:45462539-45462376 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 591-746 |
| Cow position: | chr4:65042309-65042152 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 125 |
| Conread position: | 595-747 |
| Cow position: | chr4:55844428-55844582 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 598-746 |
| Cow position: | chr4:63218166-63218311 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 600-733 |
| Cow position: | chr4:64702118-64701988 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 728-902 |
| Cow position: | chr4:43351034-43351223 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 747-887 |
| Cow position: | chr4:66930272-66930423 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 747-898 |
| Cow position: | chr4:13515959-13515794 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-903 |
| Cow position: | chr4:10489819-10489649 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.