Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 563-736 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 570-674 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 570-746 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 571-671 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-692 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 571-733 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 571-734 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 138, 16 |
| Conread position: | 571-745 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 27, 146 |
| Conread position: | 571-746 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-747 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 571-910 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 571-911 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 362 |
| Conread position: | 571-912 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 574-746 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 139 |
| Conread position: | 578-746 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 579-682 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 579-704 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 579-718 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 579-733 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 142 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 579-746 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 579-747 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 579-747 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 580-745 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 580-746 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 580-857 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 581-744 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 581-745 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 581-746 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 582-746 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 584-708 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 585-746 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 588-746 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 591-746 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 591-912 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 128 |
| Conread position: | 604-746 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 604-746 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 604-746 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 113 |
| Conread position: | 610-744 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 624-731 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 625-746 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 747-894 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-902 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 747-903 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 749-912 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 164 |
| Conread position: | 749-912 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 11, 166 |
| Conread position: | 754-901 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 754-912 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 755-912 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 148 |
Show alignments to all cow chromosomes.