Cow genome map

Conread name: Ss1.1-Utr1-UTR010040E01.5

Conread position: 552-727
Cow position: chr6:35713917-35714092 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 46, 168

Conread position: 565-747
Cow position: chr6:27636368-27636184 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 122

Conread position: 571-746
Cow position: chr6:6786889-6786716 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 145

Conread position: 571-746
Cow position: chr6:50825647-50825468 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 571-747
Cow position: chr6:29690072-29690245 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 27

Conread position: 571-747
Cow position: chr6:61211959-61211780 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 571-912
Cow position: chr6:63238136-63238507 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 327

Conread position: 577-746
Cow position: chr6:42098780-42098951 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 107

Conread position: 578-746
Cow position: chr6:47159215-47159378 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 128

Conread position: 578-746
Cow position: chr6:54084600-54084433 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 135

Conread position: 578-912
Cow position: chr6:60373486-60373858 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 17, 216

Conread position: 579-681
Cow position: chr6:56674996-56674893 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 579-705
Cow position: chr6:53147995-53148120 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 22

Conread position: 579-741
Cow position: chr6:67424758-67424592 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 579-745
Cow position: chr6:49414148-49414315 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 19, 83

Conread position: 579-746
Cow position: chr6:30021633-30021469 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 141

Conread position: 579-746
Cow position: chr6:32521326-32521496 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 579-746
Cow position: chr6:55462013-55461845 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 123

Conread position: 579-746
Cow position: chr6:68020051-68020219 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 46

Conread position: 579-747
Cow position: chr6:25627873-25627693 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 64

Conread position: 579-903
Cow position: chr6:39744038-39743698 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 134

Conread position: 580-857
Cow position: chr6:65305539-65305834 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 84

Conread position: 583-746
Cow position: chr6:49099626-49099464 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 11, 43

Conread position: 585-732
Cow position: chr6:49932054-49931903 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 588-746
Cow position: chr6:61431533-61431694 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 124, 0

Conread position: 592-746
Cow position: chr6:19711088-19710936 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 0

Conread position: 600-746
Cow position: chr6:26124999-26125147 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 126
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 107, 0

Conread position: 609-746
Cow position: chr6:53570018-53570159 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 747-894
Cow position: chr6:61211753-61211595 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 747-911
Cow position: chr6:56674512-56674333 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 755-903
Cow position: chr6:68020252-68020405 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 758-902
Cow position: chr6:29690543-29690697 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.