Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010040E01.5 |
| Conread position: | 571-746 |
| Cow position: | chr7:13808668-13808847 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 149 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 571-746 |
| Cow position: | chr7:14421106-14420927 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-746 |
| Cow position: | chr7:28006675-28006505 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 571-746 |
| Cow position: | chr7:61777153-61776974 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 573-746 |
| Cow position: | chr7:4544356-4544175 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 577-746 |
| Cow position: | chr7:11953303-11953135 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 579-746 |
| Cow position: | chr7:965935-966096 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 579-746 |
| Cow position: | chr7:5216977-5217148 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 579-746 |
| Cow position: | chr7:7245359-7245525 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 579-746 |
| Cow position: | chr7:8880833-8880658 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 579-746 |
| Cow position: | chr7:37189478-37189648 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 16, 106 |
| Conread position: | 579-746 |
| Cow position: | chr7:40458030-40457860 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 579-746 |
| Cow position: | chr7:44009857-44010025 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 580-746 |
| Cow position: | chr7:76075-76243 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 580-746 |
| Cow position: | chr7:8983368-8983198 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 582-746 |
| Cow position: | chr7:21926768-21926605 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 582-747 |
| Cow position: | chr7:33933359-33933194 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 143 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 584-731 |
| Cow position: | chr7:14532203-14532354 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 585-733 |
| Cow position: | chr7:27798346-27798498 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 603-746 |
| Cow position: | chr7:14214525-14214670 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 613-746 |
| Cow position: | chr7:37206832-37206967 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 624-746 |
| Cow position: | chr7:47182354-47182229 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 707-903 |
| Cow position: | chr7:40708508-40708300 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 726-912 |
| Cow position: | chr7:76244-76444 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 747-887 |
| Cow position: | chr7:8041080-8040930 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-912 |
| Cow position: | chr7:14214698-14214876 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 747-912 |
| Cow position: | chr7:40457832-40457651 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 754-903 |
| Cow position: | chr7:33933157-33932995 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.