Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010041E06.5 |
| Conread position: | 6-334 |
| Cow position: | chr15:23263954-23264275 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 17-225 |
| Cow position: | chr15:4894926-4895133 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 82, 164 |
| Conread position: | 17-243 |
| Cow position: | chr15:48411742-48411519 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 187, 41 |
| Conread position: | 17-322 |
| Cow position: | chr15:12362599-12362898 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 185, 92 |
| Conread position: | 23-336 |
| Cow position: | chr15:16592251-16591943 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 6, 126 |
| Conread position: | 24-174 |
| Cow position: | chr15:36095018-36094871 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 9 |
| Conread position: | 24-188 |
| Cow position: | chr15:11300069-11299906 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 24-314 |
| Cow position: | chr15:6492647-6492941 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 24-324 |
| Cow position: | chr15:32607545-32607252 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 24-328 |
| Cow position: | chr15:10574711-10575014 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 24-389 |
| Cow position: | chr15:12612633-12612985 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 85, 147 |
| Conread position: | 24-509 |
| Cow position: | chr15:40103184-40103662 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 28 |
| Conread position: | 25-322 |
| Cow position: | chr15:319265-319562 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 177, 152 |
| Conread position: | 25-322 |
| Cow position: | chr15:21818417-21818124 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 25-328 |
| Cow position: | chr15:42860828-42860526 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 25-348 |
| Cow position: | chr15:2762248-2762565 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 25-510 |
| Cow position: | chr15:683359-683830 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 26-322 |
| Cow position: | chr15:21446639-21446940 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 27-310 |
| Cow position: | chr15:4633015-4632738 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 27-328 |
| Cow position: | chr15:35650098-35649802 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 6 |
| Conread position: | 36-172 |
| Cow position: | chr15:8699621-8699489 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 48-328 |
| Cow position: | chr15:40061444-40061719 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 108-311 |
| Cow position: | chr15:1661514-1661718 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 123-348 |
| Cow position: | chr15:31979350-31979575 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 328-499 |
| Cow position: | chr15:36628753-36628583 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 332-510 |
| Cow position: | chr15:40061978-40062159 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 372-505 |
| Cow position: | chr15:4631857-4631721 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 493-711 |
| Cow position: | chr15:4631668-4631454 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 66 |
| Conread position: | 498-711 |
| Cow position: | chr15:8699108-8698897 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 502-674 |
| Cow position: | chr15:12613368-12613547 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 166 |
| Conread position: | 848-1212 |
| Cow position: | chr15:10480350-10479988 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 247, 87 |
| Conread position: | 979-1201 |
| Cow position: | chr15:1235892-1236115 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 118, 91 |
Show alignments to all cow chromosomes.