Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010041E06.5 |
| Conread position: | 17-188 |
| Cow position: | chr2:32501869-32501701 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 17-323 |
| Cow position: | chr2:73189629-73189921 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 192, 85 |
| Conread position: | 17-328 |
| Cow position: | chr2:10293336-10293636 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 125 |
| Conread position: | 20-328 |
| Cow position: | chr2:42335758-42335457 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 23-278 |
| Cow position: | chr2:24395150-24394900 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 24-149 |
| Cow position: | chr2:28828116-28827991 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 58 |
| Conread position: | 24-171 |
| Cow position: | chr2:37792704-37792556 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 24-328 |
| Cow position: | chr2:6240376-6240680 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 131 |
| Conread position: | 24-328 |
| Cow position: | chr2:75678027-75677731 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 24-510 |
| Cow position: | chr2:36359214-36359710 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 24-514 |
| Cow position: | chr2:7208884-7209365 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 335 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 165 |
| Conread position: | 24-522 |
| Cow position: | chr2:74394593-74394103 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 52 |
| Conread position: | 25-239 |
| Cow position: | chr2:11728169-11728379 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 181, 138 |
| Conread position: | 25-323 |
| Cow position: | chr2:36562484-36562782 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 146 |
| Conread position: | 25-336 |
| Cow position: | chr2:32436135-32435831 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 180, 47 |
| Conread position: | 25-388 |
| Cow position: | chr2:15953646-15953284 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 150, 247 |
| Conread position: | 25-504 |
| Cow position: | chr2:46467705-46467230 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 25-510 |
| Cow position: | chr2:13483224-13482750 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 340 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 25-510 |
| Cow position: | chr2:39853193-39853675 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 26-320 |
| Cow position: | chr2:63294750-63294458 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 83, 7 |
| Conread position: | 32-492 |
| Cow position: | chr2:85070856-85070401 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 249, 76 |
| Conread position: | 40-320 |
| Cow position: | chr2:25242962-25243238 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 160, 85 |
| Conread position: | 53-328 |
| Cow position: | chr2:32461354-32461072 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 91-355 |
| Cow position: | chr2:31707642-31707381 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 324-647 |
| Cow position: | chr2:770134-769823 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 50 |
| Conread position: | 326-504 |
| Cow position: | chr2:11728489-11728668 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 326-506 |
| Cow position: | chr2:36562809-36562995 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 326-510 |
| Cow position: | chr2:24394814-24394627 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 326-514 |
| Cow position: | chr2:32461049-32460856 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 328-510 |
| Cow position: | chr2:3728518-3728701 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 71, 167 |
| Conread position: | 335-478 |
| Cow position: | chr2:32435807-32435662 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 507-711 |
| Cow position: | chr2:36359774-36359982 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 513-709 |
| Cow position: | chr2:39853777-39853978 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 859-1153 |
| Cow position: | chr2:7209635-7209934 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 6 |
| Conread position: | 919-1208 |
| Cow position: | chr2:74393224-74392941 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 937-1212 |
| Cow position: | chr2:36360158-36360435 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 49 |
Show alignments to all cow chromosomes.