Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010041E06.5 |
| Conread position: | 10-328 |
| Cow position: | chr7:49443822-49444133 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 187, 23 |
| Conread position: | 16-328 |
| Cow position: | chr7:20432085-20431783 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 20-195 |
| Cow position: | chr7:63962740-63962566 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 23-151 |
| Cow position: | chr7:14386007-14385878 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 23-507 |
| Cow position: | chr7:63019207-63019708 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 24-174 |
| Cow position: | chr7:60468087-60467936 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 24-322 |
| Cow position: | chr7:24485009-24485309 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 24-322 |
| Cow position: | chr7:67493474-67493787 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 31, 209 |
| Conread position: | 24-323 |
| Cow position: | chr7:47115191-47114891 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 24-328 |
| Cow position: | chr7:25248757-25249063 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 161 |
| Conread position: | 24-469 |
| Cow position: | chr7:23450899-23450442 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 162 |
| Conread position: | 24-491 |
| Cow position: | chr7:31863334-31863809 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 129 |
| Conread position: | 24-496 |
| Cow position: | chr7:20108506-20108020 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 24-506 |
| Cow position: | chr7:27558890-27559358 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 127 |
| Conread position: | 24-506 |
| Cow position: | chr7:49289058-49289531 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 78, 100 |
| Conread position: | 25-323 |
| Cow position: | chr7:22678410-22678714 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 25-341 |
| Cow position: | chr7:44681109-44681415 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 173, 22 |
| Conread position: | 26-315 |
| Cow position: | chr7:17958937-17959218 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 178, 137 |
| Conread position: | 29-328 |
| Cow position: | chr7:26929924-26929627 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 172, 37 |
| Conread position: | 38-510 |
| Cow position: | chr7:1396613-1397082 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 102 |
| Conread position: | 39-328 |
| Cow position: | chr7:37020377-37020663 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 50-322 |
| Cow position: | chr7:18937405-18937124 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 52-499 |
| Cow position: | chr7:20290978-20290525 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 121 |
| Conread position: | 69-540 |
| Cow position: | chr7:53013893-53014349 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 96-190 |
| Cow position: | chr7:64393870-64393963 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 116-323 |
| Cow position: | chr7:55282031-55281829 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 36 |
| Conread position: | 321-510 |
| Cow position: | chr7:1738819-1738631 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 134 |
| Conread position: | 326-506 |
| Cow position: | chr7:25249084-25249265 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 326-513 |
| Cow position: | chr7:18446347-18446155 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 328-508 |
| Cow position: | chr7:20431758-20431575 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 174 |
| Conread position: | 337-506 |
| Cow position: | chr7:26929593-26929423 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 344-494 |
| Cow position: | chr7:37020702-37020855 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 499-705 |
| Cow position: | chr7:1738572-1738370 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 507-735 |
| Cow position: | chr7:26929372-26929144 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 924-1212 |
| Cow position: | chr7:1737749-1737468 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 62 |
Show alignments to all cow chromosomes.